Scyliorhinus canicula (smaller spotted catshark): 119966982
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Entry
119966982 CDS
T11175
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03020
RNA polymerase
scau04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119966982 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119966982 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119966982 (polr1c)
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119966982 (polr1c)
RNA polymerase I system
RNA polymerase I
119966982 (polr1c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
119966982
NCBI-ProteinID:
XP_038654885
LinkDB
All DBs
Position
6:12551593..12586928
Genome browser
AA seq
347 aa
AA seq
DB search
MAAARERVEVIRERVVLREFGIQNVHTTDFPGNYPGYDDTWKQQRFEENFRVDIVRLEED
TLEFDMVGIDAAIANAFRRILLAEVPTMAVEKAFIYNNTSIVQDEILAHRLGLIPIKADP
RLFEYRSTGDEEGTEIDTLQFQLKVKCTRNPKAQKDSSDPEELYFNHKVYSKQMKWIPIG
NQADLFGQVDIRPVHDDILIAQLRPGQEIDVVVHCVKGIGKDHAKFSPVATASYRLLPDI
TLLSPVEGELADKLKRCFSPGVIEVQTANGRKFATVVNSRLDTCSREIFRHDDLKNLVRL
GRVRDHYIFSVESTGILLPEMLVSEALKVLMTKCRRFLNELDAVQMD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgcgagagcgagtggaggtgatccgcgagcgggtggtgctcagagagttc
ggcatccagaacgtgcacaccactgatttcccaggaaattatcccggctacgacgacaca
tggaagcagcagcggtttgaggagaatttcagggttgatattgttcggctggaggaagat
acactggagtttgatatggtcggaattgacgctgcgattgcaaatgccttccgcaggatc
ctgcttgctgaggtcccaactatggctgtggagaaagcatttatctacaacaatacctcc
attgtacaggatgagattctggcacacagactggggctcatccccatcaaggcagaccca
cgactgtttgagtacaggagcacaggggatgaagaaggcacggagatcgacactcttcag
tttcagcttaaagtgaagtgtacaagaaaccctaaagcacagaaagattcctcagaccct
gaagaactatattttaatcataaagtctactccaagcagatgaagtggataccaattggg
aaccaggctgacctcttcggacaggttgacatccgacctgtacatgatgatatcctgata
gctcagctccgccctggacaggaaattgatgtcgtcgtgcactgcgtgaaaggaatcggt
aaagaccacgccaagttttctcctgttgctacggcaagttaccgacttcttcctgatata
actctgctcagtcctgtggaaggggagctggcagacaaactaaaacgctgtttctctcct
ggtgtcattgaggttcagacagcgaacgggagaaaatttgcaacagttgtgaattcccgc
ttggacacctgcagtcgtgagatattccgccatgatgaccttaagaatttagtccgactt
ggcagagttcgcgatcactacatcttttcagttgagtcgacaggcattcttctcccggaa
atgttggtgtctgaagccttgaaagtgttgatgacaaaatgcaggcgatttttaaatgaa
ctggatgcagtacagatggactga
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