Scyliorhinus canicula (smaller spotted catshark): 119967008
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Entry
119967008 CDS
T11175
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119967008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119967008
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Transforming growth factors (RSTK binding)
119967008
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
119967008
NCBI-ProteinID:
XP_038654925
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Position
6:16943694..16954836
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AA seq
371 aa
AA seq
DB search
MVSGWNMLLVAVLCSLLWSVLADGIHHHYHHHVEEVKATMLGKLGMMEVPRLAKRDAENT
VVPAHVRNKYISMLQLHKDKERKRRALPSLAGILRGVPGNLDTTGEVLYSDPSRQRLIFD
MKGLIPENSEVTMAELKLFKKGVHKGALPPRRHSRPVNNARVSVYWVKILADGSNRTSLI
DSRLIPILDSGWKMFDVTQAVHYWQNTEESMMYLEVWMEAERPGRHAAELARFVSFTSQN
PADRKLGKPELVLYTLNFNEYGADGDCAGSRNRRSGSCCRQEYFINFRELTWTQYWIIEP
PGYQAFHCVGGCKQPQWPFDYGERSCAVVESASLPVMYLVKKGDYTEIEVAEFPNMITEK
CGCTMDNVSVI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcggttggaatatgctgttggtcgcggtgctctgctccttactgtggtctgtg
ttggctgatgggattcaccaccattatcatcaccatgttgaggaggtcaaggctacaatg
cttgggaaactggggatgatggaggtgccgcgccttgccaagagagacgcggagaacacg
gtggtcccggctcacgtgaggaacaagtacatctccatgctgcagctgcacaaggacaag
gagaggaagcggagagctctgcccagcctggccggcatcctacgaggagttccaggcaat
ttggatacaacaggagaggtgctgtattcggaccccagcaggcagaggctgatttttgat
atgaaggggctgatccctgaaaacagtgaggtgaccatggccgagctcaagctcttcaag
aaaggcgtccacaagggagcgctccctcccaggagacacagcaggccagtgaacaacgcc
agggtcagtgtgtactgggtcaagattttggctgacggcagtaacaggacctccctcata
gactccaggctgatccccattctcgactctgggtggaaaatgttcgacgtcacccaggct
gtccactactggcagaacaccgaggagagtatgatgtacctggaggtctggatggaagct
gagcgaccaggccggcacgctgctgagctggccagattcgtcagcttcacatcccagaat
cctgctgaccggaagctggggaaaccggaattggtcctgtacaccctcaacttcaacgag
tacggagctgatggggactgtgctgggagccgaaaccggagaagtgggagctgctgcagg
caggaatacttcatcaacttcagggagctgacctggacgcagtactggatcatcgagccc
cccggctaccaggcctttcactgcgtggggggctgcaagcagccacagtggcccttcgac
tatggtgagaggagctgtgcggtggtggagagcgcctccctgcccgtgatgtacctggtg
aagaagggggactacaccgagatcgaggtggcagagttccccaacatgatcactgagaag
tgtggctgcaccatggacaacgtctcggtgatttaa
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