Scyliorhinus canicula (smaller spotted catshark): 119967116
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Entry
119967116 CDS
T11175
Symbol
ostm1
Name
(RefSeq) osteopetrosis-associated transmembrane protein 1 isoform X1
KO
K23863
osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119967116 (ostm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119967116 (ostm1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119967116 (ostm1)
Membrane trafficking [BR:
scau04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
119967116 (ostm1)
Ion channels [BR:
scau04040
]
Chloride channels
Chloride channel (CLC)
119967116 (ostm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OSTMP1
CECR6_TMEM121
Motif
Other DBs
NCBI-GeneID:
119967116
NCBI-ProteinID:
XP_038655147
LinkDB
All DBs
Position
6:40819592..40844934
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AA seq
238 aa
AA seq
DB search
MHKERMCVNLAWLPSSTHLSHLLMWRLFIKMHIFFTTEDEQEVVNVVNHVIKESSGNISC
SKQLLSSDRLQIVLNMYQYLHSIWTDSVCDACLNSNGTAPSVDTVIFQKMLNDSLNCFDR
YSKYPDHGNRSDLCIKCKTSYNNLTKWYNKMADTQSIMCIDIVDAMNLTRQLWSKTYNCT
VPCSDTVPVIAVSTFLLFLPVIFYLSTYLHSEQKKMKLMEPKRLKPCSSAAHIEDRPS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagaaaggatgtgtgttaaccttgcttggctcccctccagcacccacctctcc
cacctgctgatgtggcgccttttcatcaagatgcatatattctttaccactgaagatgag
caagaggtagtaaacgttgtgaatcatgttatcaaggaaagttcagggaacatcagctgt
tcaaagcaacttttgagctcagaccgtttgcaaatagtcctgaacatgtatcaatatctg
cactcaatttggaccgactctgtgtgtgatgcctgtttaaatagtaacggaacagcacca
tcagtggacacagtaatctttcagaagatgctgaatgattctttgaattgttttgaccgt
tattcgaaatacccagatcatggcaaccgttctgatctttgcattaagtgtaaaacgtct
tacaataatttaactaaatggtacaacaaaatggcagatacgcagagcatcatgtgtata
gacatcgttgatgcaatgaacttgacgcggcagctgtggagcaaaacctataactgcact
gtcccctgcagtgacaccgttccagtcattgcagtgtcaacgtttctccttttcctacct
gtcatcttctacctcagcacctaccttcactctgagcagaagaaaatgaagcttatggag
ccaaaacgcttgaagccatgcagcagtgcagcacatattgaagacagaccttcctga
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