Scyliorhinus canicula (smaller spotted catshark): 119967130
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Entry
119967130 CDS
T11175
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04136
Autophagy - other
scau04140
Autophagy - animal
scau04216
Ferroptosis
scau04621
NOD-like receptor signaling pathway
scau04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119967130 (atg5)
04136 Autophagy - other
119967130 (atg5)
09143 Cell growth and death
04216 Ferroptosis
119967130 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119967130 (atg5)
04622 RIG-I-like receptor signaling pathway
119967130 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119967130 (atg5)
03029 Mitochondrial biogenesis [BR:
scau03029
]
119967130 (atg5)
Membrane trafficking [BR:
scau04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
119967130 (atg5)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119967130 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
DUF8018
Motif
Other DBs
NCBI-GeneID:
119967130
NCBI-ProteinID:
XP_038655174
LinkDB
All DBs
Position
6:43509633..43760901
Genome browser
AA seq
290 aa
AA seq
DB search
MTDDRDVLRDVWFGRIPTCFTLSQDEITEREAEPYYLLLPRVSYLMLVTDKAKKHFQKVM
RQEDVGEMWFEYEGLPLKWHYPIGLLFDLHASNTALPWNIIVHFKNFPETELLHCLTKDA
VEAHFMSCIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYPTDEG
GFRYVPFRIYQITSGPQIHTLLGNPRLLLHQSLLSIKSTVNWGKRSTTSGSYQMCDHSHH
GRHRKSPFCQFSQVFKQWKKMMSKSSNTFMQLFLHIIPGCEIKLMIIHTV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacagagatgtattacgggatgtttggtttggaagaataccaacctgtttc
actttatctcaggatgaaataactgaaagagaggcggaaccttattatctgcttttacca
agagtgagttatttgatgctggtcactgacaaagctaaaaagcacttccagaaagttatg
agacaggaggatgtgggagagatgtggtttgaatatgaaggactacctctgaagtggcat
tatccaattggtttactttttgaccttcatgcatcaaacactgcactaccgtggaatatt
attgtacatttcaagaactttcctgaaacggaacttcttcactgcctcacgaaagatgct
gttgaagctcattttatgtcttgcattaaagaagctgatgccttaaagcataaaagtcaa
gtaatcaatgagatgcagaaaaaggatcataagcagctttggatgggcttacaaaatgac
aagtttgaccagttttgggctatcaatcgaaaacttatggagtatccaacagatgaagga
gggttccgatatgttcctttcaggatatatcagatcacttctggtccacaaatccataca
ctgttggggaatcctcgtcttctacttcaccagtcccttttgtcgatcaaatccaccgta
aattggggcaaaaggtccacaacgagcgggagctaccaaatgtgcgaccactcacaccat
ggtcgccaccggaagtcccctttctgtcaatttagtcaggtgttcaagcaatggaagaaa
atgatgtccaaatcgagcaacacatttatgcagttgttccttcatatcatccctggctgt
gagattaaattgatgatcatacataccgtgtaa
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integrated database retrieval system
