KEGG   Scyliorhinus canicula (smaller spotted catshark): 119967148
Entry
119967148         CDS       T11175                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:scau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scau04121]
    119967148
Ubiquitin system [BR:scau04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119967148
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 119967148
NCBI-ProteinID: XP_038655222
LinkDB
Position
6:complement(53910994..54233689)
AA seq 1819 aa
MPADTKQIYELESELYFLIARFLASGPCQKATEVLIREVEEKQLLPKRIDWKGIEHPRTY
ENLVKTHRHVAPDHLLQICQRLGPLLEKETPQSVPGVHSLLGAGRQSMLRTNKSCKHVVW
KGSALAALHRGRPPELPINYGSPPNIVDTIRARQLTGSLRLSQLVPTAVYLHMKMHKRIL
GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWTTDDGRLLATLRGHSAEISDMTVNYENTMI
AAGSCDKIIRVWCLRTCAPLAVLQGHTASITSVQFSPMCTGSMRFLSSTGADGTVCFWQW
DAGMYKFSHRPIKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGSGQPEKISE
LEFHTDKVDSIQFSNMSDRFVSGSRDGTARIWQFRRQEWKSILLDMAVKPAGYNPQGLED
KVNKLKVTMVAWDRHDNTVITAVNNLTLKVWNSCTGQLIHVLMGHEDEVFVLEPHPFDPR
VLFSAGHDGNVIVWDIVRGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLI
SGFGSSSKYDKISDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPP
KYQRLVPGRENCKDDQLIPQMGVSATGLNQVLSQQASHEISPLDNIIQRLQQEQDQRLTT
GTNNTLNRGRIGSQSSASEMHSPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSR
RVVVPELTQGVASKQEECRTAKGEEEINIFKYEKKKKSAIQVQRENKMHSYERLQESGEG
RKQNRQSIHNYCTRSAMDEGSRSSQQNVDYNSSSEEAEVRAVNGVTSEEDGDAWHNESSS
SSDYSSDYSDWTADAGINLQPPKKSSRQQAKKAVSSSEDEGEKEKGKEKETKKERKKHKE
DKDGTAPPKIRRKPREKRIKGPPAGVIPKQGETLEEWLPPVWITDTMPRRCPFVPQMGDE
VYYFRQGHEAYVEMAKKLKLFRINTKKQAWHKMDLREQELVKIVGIKYDVGPPSLCCIKL
AFIDPDTGKLTGGAFSMKYHDMPDVIDFLVLRQQFDETKSRRWKIGDRFRSVIDDAWWFG
TIESQEPLQPDYPDSLFQCYNVCWDNGDTEKMSPWDMEVIPADAVFPTEPGSSVPLTAAE
HKIQLYKSQEGEWGCRKRDAECERIHGGISQLITLDIAAPFVAPVDLQAYPLYCTVVAYP
TDLNTIKERVENRFFRRMSSLMWEVRYIEHNARTFNEPGSPIVKSAKLVIDVLLQFIKDQ
SSTDILPFYNNLKKKMMSDEEDEDDEAENSDVPGTSTKNKKENQPRRKPRNRVQPPDINA
WKVRCRELLHLIFQCEDSEPFRRPVDLFQYPDYRDIVDTPMDFGTVQETLEAGNYETPME
VRKDVRLVFSNSKSYTPSKKSRIYSMSLRLSAMFEEHMSSIISDYKAAVRFYSRKKASIQ
RRKRRRSSSPSSSAASSPERKRRFLKPQAKVEQPISSLLSLPVRSAGMKTSVIQANGKAG
ESASVVRTRSTRLRPGTTSVTETPSPLGTVAAVSKSSVAASTGSATDHNAKPSKAQNNLC
YPKLSESKHNTQTSLTDEKPEKRRLTRRNKSTPFKQPKGDIKAESSAQKTPQINGHSACI
SESVVKRGPGRKPQEVKSLKGPGKKRGRKSKKELLIIQQQNEMKKAEVKKDTSNENGEEA
TSESSSSSESNTQRKSLQKKPTRGRKPKGKSLQAKSKLTVAAKRKMQTRSNRRKHEEPVE
PIESAEPVEDDKRTEEAVGSKSVMKTRNQGRRTTCYNEEDSEEEQRQLLFEDSSLTFGTS
SRGRLRKLTEKAKANLIGW
NT seq 5460 nt   +upstreamnt  +downstreamnt
atgcctgctgatactaaacaaatctatgagttggaatctgaattgtacttcctaatagcc
agatttttggcatcaggaccctgtcagaaggcgaccgaggtcctgatacgcgaagtggag
gagaagcagctgctgccgaaacggatagactggaagggcattgagcatcccaggacctac
gaaaatttggtgaaaactcatagacacgtagctccagatcatcttcttcagatatgtcag
cgacttggacctctcttagagaaagagaccccacagagtgtcccaggggtgcattcgtta
ctgggagctggaagacagtctatgcttcgaacaaacaaaagttgtaaacatgtcgtatgg
aaaggatcggcacttgcagcattgcatcgagggaggcctcctgagctaccaatcaattat
ggtagcccacctaatatagtggacactattcgggcacggcagcttaccgggagcctgcga
ctcagtcagcttgttcctactgctgtatatctacatatgaagatgcacaagagaattctg
gggcacctatcatctgtttactgtgttacttttgatcgaacagggaggagaatatttact
ggatccgatgattgtctggtgaagatctggacaacagatgatggcagactactggcaact
ttgcgaggacattctgctgaaatctcggacatgacagtaaactatgaaaataccatgatt
gctgcaggcagctgtgataaaatcattcgggtttggtgcctccgaacatgtgcgccgttg
gcagttctgcagggtcacactgcatccatcacatccgtgcagttttcgccaatgtgcact
ggctctatgagattcctgtcttccacaggagcagatggcacagtttgtttctggcagtgg
gatgctggcatgtacaaatttagccatcggccaattaaatttactgagcgaccaaggcca
ggggtccaaatgatctgttcttctttcagtgctggtggaatgtttttggcaacagggagc
acagaccatattataagagtttactactttgggtcagggcaacctgagaagatttcagag
ttggagtttcatactgacaaagttgacagtattcagttctccaacatgagtgacaggttt
gttagcggaagtcgtgatgggactgcaaggatctggcagtttcgacggcaagagtggaaa
agcattttactggacatggctgtcaagccagctgggtataatccacaaggattagaagat
aaagtgaacaaactgaaagtaaccatggtggcatgggatcgtcatgacaacactgttatt
acagcagtcaataaccttacgttgaaggtttggaattcttgcactggtcagcttatacat
gttctgatgggacatgaagatgaagtgtttgtacttgaacctcatccttttgatcccagg
gtcctcttctctgcagggcatgatggcaatgtgatcgtttgggacatagtgcggggagtg
aaaattcgatcttatttcaatatgattgagggtcaggggcatggagcagtgtttgactgt
aaatgctcccctgatgggcagcattttgcatgtactgactcccatgggcatcttctcatc
tctggttttggttcaagcagcaaatatgacaagatttctgatcagatgttcttccacact
gattatcgacccttaattcgcgatgccaacaactatgtcttggatgagcagacacaacag
gcgccacatctcatgccacctccattcctcgttgatgtggatggcaatccccatccacca
aaataccaacgactggtacctggacgcgagaactgtaaagatgaccaactcatcccacag
atgggtgtgtctgccacagggttaaaccaggttcttagtcagcaagcaagccatgaaatc
agccctttagacaacattattcaacgacttcaacaggaacaagaccagagactgactaca
ggtaccaacaacaccttgaacagaggaagaataggctctcaaagttcggcttctgaaatg
cattcacctccaaatgttggattgagacgcagtggacaaatcgaaggagtacggcagatg
cacagtaatgcaccaagaagcgaaattgccactgaacgggaccttgtggcctggagtcga
agagtggtagtaccagaactaacccaaggtgtagccagtaagcaggaagaatgtagaaca
gccaaaggggaagaggagataaacatttttaaatatgaaaagaaaaagaaatcagcaatt
caggttcaacgagaaaacaagatgcattcatacgaacgcttgcaagaaagtggagaaggg
agaaaacagaatcgccagagtatacacaattactgcacacggtctgcaatggatgagggc
agcagaagttcacagcagaatgtagattacaacagctcctcagaggaggctgaagtccgt
gctgtcaatggtgtgacctcggaggaagatggggatgcctggcacaatgaaagcagcagc
tccagtgactattcaagtgactattccgactggacagcagatgccggcattaacctccag
cccccaaagaaatcttcacgacaacaagcaaaaaaagctgtcagcagttcagaagacgaa
ggagaaaaagagaaagggaaagaaaaagagaccaagaaggaaaggaagaagcataaagag
gataaggatggcacagcacctccaaagatcagaagaaaaccgagggagaaaagaataaag
ggaccaccagctggagtcataccgaagcagggagaaactctggaagaatggcttccacct
gtgtggattactgatactatgcccaggcgctgcccttttgtaccacaaatgggagatgag
gtctactattttcgacaaggccatgaagcctatgttgaaatggctaagaagctaaagctt
tttcgtataaatactaaaaagcaggcgtggcacaagatggatttacgggaacaagagctg
gtgaaaatagttgggatcaaatatgatgtgggacccccgtctctgtgctgtatcaaacta
gctttcattgacccagacacgggcaaactgacaggaggcgcgttttctatgaagtaccat
gatatgccagatgtaattgattttctagtgctgcgtcagcagtttgatgagacaaaatct
cgacgatggaagattggtgatcgatttcggtcagtgattgatgatgcatggtggtttggg
accattgaaagccaggagcctctacagccagactatcccgatagtctattccagtgctac
aatgtctgctgggataatggagacactgaaaagatgagcccttgggatatggaagtgata
ccagctgatgctgttttccccactgaacctgggtcaagtgttcccttgactgctgctgag
cataagatacagctgtacaaatctcaggaaggagaatggggctgcaggaagagagatgct
gaatgtgaaagaattcatggagggatcagtcagctcataacgctggacattgctgctcca
tttgtggcccctgtggacctccaggcttatcctttatattgtacagtagtggcttacccc
acggacctcaacacaattaaagagagggtagagaataggtttttcagacgcatgtcatct
ctgatgtgggaggtacgatatattgaacacaatgcacggactttcaatgaacctggaagc
cccatagttaaatctgccaaattagtcatcgatgttctcctgcagttcataaaagaccag
agttctactgacatccttccattctacaataacctaaagaagaaaatgatgtcagatgag
gaagatgaggatgatgaggcagagaattctgatgttccaggaacctccaccaagaataag
aaggaaaaccagccaaggaggaaaccgcgtaatcgtgttcagccacctgacattaacgcc
tggaaggtgcgctgcagagagctgctgcatctaatctttcagtgtgaagactcggagcct
ttccgtcggcctgtggatttatttcagtatccagattatagagacatcgttgacacccca
atggattttggaaccgttcaagagacactggaagctggaaattatgagacgccaatggaa
gtgcgtaaagatgtgcgccttgtttttagcaactccaagtcttacactcccagcaaaaag
tcaaggatctacagtatgagtttacgactgtcggcaatgtttgaagaacacatgagctcc
atcatatctgattataaggcagcagttcgattctactcgagaaagaaggcttccatccaa
cggcgcaagcggagaagaagtagctccccctctagcagtgctgcatcaagccctgaaagg
aaacgaaggtttttaaaaccccaagccaaggtggagcagcccatttcttcactcttatct
ctgcctgtgagatcggcaggtatgaaaacctcggttattcaggccaacggcaaggctggc
gaatctgcttctgtcgtccgaaccagaagcacaaggctacgaccggggaccacctctgta
actgaaacaccatctccgttagggacggtagcagcagtttcaaaatcatctgttgcagca
tcaacaggaagtgcaacagaccataacgctaagccatcgaaagcccagaacaatctttgt
tatcctaaactatcggaatcaaaacacaatactcagacttcattgacagatgaaaagcct
gagaaaaggaggttaacacgtcgaaataaatcaacaccatttaaacaacctaaaggtgac
atcaaagctgaatcttcagcacagaagactccacaaataaatggacacagtgcatgtatc
tctgaatctgtggtcaagagaggtcctggtaggaagccgcaggaagtaaaaagtctaaaa
ggacctggtaagaaaagaggtaggaaaagtaaaaaagaactacttattattcaacaacag
aatgaaatgaagaaagcagaagtaaaaaaagacacatccaatgaaaatggtgaagaagct
acctcagaaagcagctctagttcagagagcaacacacaaagaaaatctttgcagaagaaa
ccaacaagaggcaggaaacccaaaggaaagagtctacaagctaaatccaaattgacagtt
gctgctaaacgtaaaatgcagacgaggagcaacagaaggaagcatgaggagcctgtggag
cccattgagtctgcagagcctgtggaagatgacaaaaggactgaggaggccgtgggctct
aaatctgtcatgaaaacgaggaatcaaggtagacggacaacgtgctacaatgaggaggat
tcagaggaagagcaaaggcagctactgtttgaagattcctctttaacttttggaacatcc
agtaggggcaggctgcggaaactgactgaaaaagcaaaggctaacctgattggttggtaa

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