Scyliorhinus canicula (smaller spotted catshark): 119967298
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Entry
119967298 CDS
T11175
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
119967298
NCBI-ProteinID:
XP_038655566
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Position
6:87594032..87623226
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AA seq
627 aa
AA seq
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MTRWELSSLLLLLFVNITYGTHYCGIRGPSGLPGPRGPPGATGASNKGPPGMCGSAGLPG
NPGATYVGQPGMPGLPGEKGERGFCGQYGDMGPQGQQGLHGPPGLVGSPGASTKSVDGEA
GSQGSSGPPGSKGDYGKVGEPGDLGLRGENGAAEIGPPGFTGETGYPGPQGEPGPLGEVI
AGPPGAPGIPGTSGEKGESGESGSPGTTGLPGENGSHGSPGIAISMPGVDGKQGLAGIPG
MKGLPGPKGMAAKHGPPATGNPGSAGLQGEPGPRGLYGYVGEKGDPGINGGFGSSGLKGF
PGPTGLSGLKGFPGEDGNPGPSGEPGIIGLPGISGLQGDEGPTGAPGKLGIPGEEGIRGS
QGKQGAPGPQGDKGPRGRPGEFGIQGDLGFHGPLGIQGNHGPIGPAGKIGKPGPNGSSGP
PGQKGIRGDPGKRGPPGRTNLILSGAPLGGDVETFSYAESQGPPGIPGPPGVPGPSGSPG
PPGETVIQSTSNTDQSFKVILSTPYSTTGMPIVFDRILYNQANVYDSETGIFTCQIPGIY
YFSYHIHVKDRSVHVALYKNGKPVLYTYDDYKENNIDNASGGAVLQLQEIDKIYLQLPSE
QLNGLYSSNKMQSSFSGFLVHRTNLLA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggtgggaactcagttcacttctactcctgctttttgtcaacatcacctatgga
acacattactgcggtatcagaggtccatcgggtttaccaggaccaagaggcccaccagga
gcaaccggtgcttcaaataaagggcctccaggcatgtgtggatcagctggactgccagga
aacccaggagcaacctatgtggggcagccaggaatgccagggttaccaggagaaaagggt
gaaagaggattttgtggacaatatggtgacatggggcctcaagggcaacaaggattacat
gggcctccaggacttgtaggttctcctggagccagtacaaaatctgttgatggcgaggct
ggttcccaaggatcatcaggtcctccagggtcaaaaggtgattatggaaaagttggagaa
ccaggagatctgggtctgcgtggggaaaacggtgctgccgaaattggccctcctggattc
acaggagaaacggggtatccagggcctcagggtgagccaggaccccttggagaagtaatt
gcaggtccaccaggggctcctggtatccctggcacatcaggagagaaaggtgaaagtgga
gaatctggtagtcccggaactacaggtctacccggtgaaaacggatcacacggttcacct
ggtatagcaatttcaatgccaggggtagatggtaaacaaggtcttgcagggattcctggg
atgaagggtcttccaggcccaaaaggaatggcggcgaaacatggtccaccggctactgga
aatccaggttcggcaggccttcaaggtgagcctggtccgagaggattgtatggctatgtt
ggtgagaagggagacccaggaatcaatggagggtttggtagttcaggactcaaaggattt
ccagggccaacaggtctatcaggtctgaaaggttttccaggtgaagatggcaatccagga
ccttcaggagaaccaggtataatagggttgcctggaatttctggattacaaggcgatgaa
gggccaactggtgctcctggaaaattgggaattccaggagaagaaggtattcgagggtca
cagggaaaacagggtgcacctggtccgcagggtgataaagggcccagaggtagacctggt
gaatttggtatacaaggtgatcttggttttcatggaccattggggattcaaggcaatcat
gggccaattggacctgctggaaaaattggcaaaccaggtccaaatgggtcttcaggccct
ccaggacaaaaaggcatcagaggagatccaggaaaacgaggtccaccaggtcgtaccaac
cttatcttatctggagccccattgggaggagatgtggaaacatttagttacgcagaatca
cagggacctccaggcattcctggtcctcctggtgtaccaggtccatcgggttccccaggt
ccgccaggggaaactgtaatacagtcaacatcaaataccgatcaaagttttaaagtcatt
ctctctacaccatattctacaacaggaatgccaatagtttttgacagaatactttacaat
caagccaatgtctatgattcagaaactggcatttttacatgtcaaataccaggaatttac
tatttctcatatcacatccatgtcaaagacagaagtgttcacgttgcattgtataaaaat
ggtaaaccggttctatacacatatgatgactacaaggaaaacaatattgataatgcttca
gggggtgctgtactacagctacaggaaatagataaaatatatttacaattgccttcagaa
cagttaaatggtttatactcctccaataaaatgcaatcatccttctcaggatttttggtt
cacagaaccaatctattggcatag
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