KEGG   Scyliorhinus canicula (smaller spotted catshark): 119967415
Entry
119967415         CDS       T11175                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119967415 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scau03041]
    119967415 (cdc5l)
   03400 DNA repair and recombination proteins [BR:scau03400]
    119967415 (cdc5l)
Spliceosome [BR:scau03041]
 Complex B
  Other components
   Prp19 complex
    119967415 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    119967415 (cdc5l)
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119967415 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 119967415
NCBI-ProteinID: XP_038655867
LinkDB
Position
6:complement(114971689..115041258)
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDQEEETADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTAVENHQTLEPDFK
RLRQQHLDGELRSEKEESEQKKDKQRLKKKKESDLPSAILQISGVSEFTKKRSKLVLPAP
QISDAELEEVVKIGQASEIACQTVEESGMPNSASNALISEYSIANTGLSLRTARTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLATPFRTPTQDS
DGLTPRSGLTPKPGVAVTPGRTPLRDKLNINPGEEMVDYNDPSYTKQLEREHREQLRMGL
LNLPTPKNDFEIVLPENAERELEEQETEDNFIEDAADVESRRQAMKDAERERELKKRHQS
VQRNLPRPTEVNETILRPLNVEPPLTEMQKAEEMVKKEMIIMLHYDTLHHPYVDQFGKRG
KGAGSGSSNAEHISFLDHNRYEKISKEDMKKAGDLLTLEMEVVKHGMGHGDLPIDAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLETNRNHMTTEAKQAAKMEKKLKIL
LGGYQSRATGLMKQLSDLWDQIEQAHLELCTFEELKKHEDIAIPRRQESLREDVARQQER
EKELQQRYADLLLEKEGLATAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggataatgattaaaggaggcgtctggaggaacactgaggatgagattcttaaa
gcagcggttatgaaatatggcaaaaaccagtggtcacgtattgcgtctctgctgcacaga
aaatcagccaaacaatgcaaagccagatggtacgagtggttggatccaagtatcaaaaag
acagaatggtcaagggaggaagaagagaagttactgcacttggcaaagctcatgccaacg
caatggaggaccattgctccaattattggcagaacagctgcccagtgtttggaacattat
gagtatcttctagacaaggctgcacagagagatcaagaagaagaaactgctgatgatcct
cgaaaacttaaacctggcgagattgacccaaatccagaaactaagccagccaggcctgat
ccagtagatatggatgaagatgagcttgagatgctctctgaggctagagctcgtttggct
aacactcaaggcaagaaagctaagagaaaagcacgggaaaagcagcttgaagaagccagg
agacttgcagcgcttcagaagcgcagggaactgcgagctgctggcatagaaatacaaaag
aaaagaaaaaagaagagaggagtggactataatgcagagattccctttgaaaagaaacct
gctccaggtttttatgataccgctgtggaaaaccaccaaacacttgaaccagactttaaa
agactccgccagcaacatttggatggagagctaagatccgaaaaagaagaatctgaacag
aagaaagataaacagcgtctgaaaaagaagaaggaatcagatttgccgtctgctatatta
cagatcagtggagtctctgagtttaccaaaaaaagaagtaagctggttcttcccgcacca
cagatctctgatgctgaactggaagaagtagtcaaaattggtcaggctagtgagatagcc
tgccagacagtcgaagaatctggaatgccaaactctgcatccaatgctctcatttctgaa
tatagcattgccaacactggtttgagtttgagaaccgcacgcactcccgcagcccaagat
cggattctccaggaagctcaaaatttgatggcattgacaaatgttgatacgcctctgaaa
ggtggattgaacacccctctccatgaaagtgatttctctggagtaaccccacagagacag
gtggttcagacaccaaatactgtgcttgctacacctttcaggactccaacacaagacagt
gatggtttaactccacgaagtggactgacacctaaacctggtgttgcagtgaccccagga
aggactcctttacgagacaaattgaatatcaatccaggagaggaaatggtggattataat
gatccttcatacactaaacaattggaaagggagcaccgagagcaactgcgaatgggactg
ttgaaccttccgacaccaaagaatgactttgaaattgtgctcccagagaatgcagagcga
gagcttgaggaacaggaaacagaagataatttcatagaagatgctgctgatgtagaatca
cgtagacaagcgatgaaggatgctgaacgtgagagggagttaaaaaagagacaccaatca
gtacagcgaaatcttccaagacctacagaggtaaatgaaaccatcttgcgacctctgaat
gttgaaccacctctgactgagatgcagaaagctgaagagatggtgaagaaagaaatgatt
attatgctacactatgatacacttcatcatccatatgtggaccagtttggtaaaagaggg
aaaggagcaggatcaggctccagtaatgctgaacatatttctttcctggatcacaatcgg
tatgaaaaaatcagtaaagaagacatgaaaaaggcaggtgatttgttgacgctggagatg
gaggttgtcaaacatggtatggggcatggagaccttcctatcgatgcatataaccaggtg
tgggaagaatgttacagtcaggttctgtatctgcctggacagaacaggtacactcgagcc
aacctggctagcaagaaagaccgaatagaatcactggaaaaaaagctagagaccaacaga
aatcatatgaccacagaagcaaaacaggcagcaaaaatggagaaaaagctcaagatattg
cttggaggatatcagtcacgtgctacaggcctaatgaaacagttgagcgatctctgggat
caaattgagcaggcacatctggaattatgtacgtttgaagaattgaagaagcatgaagat
attgctattccaaggagacaagagtctttgagagaagatgttgcacggcaacaggagaga
gagaaggaactccagcaaaggtacgcagatctgcttctggaaaaagaagggcttgcgaca
gccaagtattga

DBGET integrated database retrieval system