Scyliorhinus canicula (smaller spotted catshark): 119967510
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Entry
119967510 CDS
T11175
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119967510
03036 Chromosome and associated proteins [BR:
scau03036
]
119967510
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119967510
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119967510
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
119967510
microRNA pathway
RISC loading complex
119967510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
bpX4
Motif
Other DBs
NCBI-GeneID:
119967510
NCBI-ProteinID:
XP_038656103
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Position
1:132707121..132896593
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AA seq
877 aa
AA seq
DB search
MEIGTPGAVGAQPLFTVPRRPGCGTMGKPIKLLANCFQVDIPKIDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVQIFGERRPVYDGKRSLYTADPIPVSTTGVDLEVTLPGEGKDRIF
RVSIKFVSRVSWHLLHEVLTGRSMPELLPGLDLDKPLSTNPVHAVDVVLRHLPSMKYTPV
GRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEV
LDIHNIDEQPRPLTDSHRVKFTKEIKDKLLTGLKVEVTHCGPMRRKYRVCNVTRRPASHQ
TFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRC
IKKLTDNQTSTMIKATARSAPDRQEEISKLVKSANYDDDPFVQEFQFKVRDEMAHVTGRV
LPAPMLQYGGRVEPSHFRLQTNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFAAQRQC
REEVLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLVIVIL
PGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQ
RPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDL
ASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYCELLAIREACISLEKDYQPGI
TYIVVQKRHHTRLFCADKNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRP
SHYHVLWDDNCFSADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEH
DSAEGSHISGQSNGRDPQALAKAVQIHQDTLRTMYFA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaaccccaggagctgttggggctcagcccctcttcacggtgccaaggcgt
ccaggatgtggtaccatgggaaaaccgattaaactgctggccaactgcttccaagtagat
atcccaaagattgacgtctacctctatgaggtagatattaaaccagataaatgtcctcgc
agggtaaacagggaagtggtcgactctatggttcagcattttaaagttcagatatttgga
gaaagaagacctgtctatgatgggaaaaggagtctctacactgcagatcccattcctgtc
agcaccactggagtggatttggaggtgacattaccaggagaaggaaaggaccgaattttc
agggtgtcgataaaatttgtttccagagtgagctggcatttgctgcatgaagttctgaca
ggccgtagtatgccagagctgctgcccggattggacctggacaagccactcagcacaaat
cctgtacatgccgtcgatgttgtcctacgacaccttccttccatgaagtacacccctgtt
ggccgctctttcttctctgcacctgaaggatatgaccatccattgggtggaggcagagag
gtctggtttggttttcatcagtctgtcagacctgccatgtggaaaatgatgctgaacata
gatgtatctgccactgctttttataaagcacagcctgtaattcagttcatgtgtgaagtt
ctagacattcataatattgatgaacaaccacgacctttgactgattcccaccgagtcaaa
ttcaccaaagagataaaagacaaacttctcacaggattgaaggttgaagtaactcattgt
ggacctatgaggagaaagtaccgtgtgtgcaatgttaccaggcgaccagccagccatcag
acgttccccttgcagctggaaagtggacagactgtggagtgcactgtagctcaatatttc
aaacagaaatacaatcttcagctaaagtacccacacctgccctgtctacaggtgggacag
gaacagaagcacacctacctgccactcgaggtgtgtaacattgtcgcggggcagcgttgt
atcaagaaactgacagacaatcaaacatcaacaatgattaaagcaacagcacgatcagca
cctgacagacaggaggagatcagtaaactagtaaaaagtgcaaactacgacgatgaccct
tttgtccaggagtttcagtttaaagtgagagatgagatggctcatgtgaccgggagagtg
cttccagctcccatgctgcagtatggagggagagtggaaccaagtcatttccgattacaa
actaatcgaacagttgctactccaagtcatggtgtttgggatatgcgagggaaacagttc
cataccggggttgaaatcaaaatgtgggcgatagcatgttttgcagcacagagacaatgt
agagaagaagtacttaagagttttactgaccagctgcggaaaatatctaaagatgcgggg
atgcctatccaggggcagccatgtttctgtaaatatgcacagggagctgacagtgtggag
ccgatgtttaggcatctgaagaacacctattcaggactccagcttgtcattgtcattcta
cctgggaaaacacctgtctatgccgaggtgaaacgtgtgggagatactcttctggggatg
gctactcagtgtgttcaagtgaagaatgttgtcaaaacgtctccacagacgttatcgaac
ctatgcctgaagatcaatgtgaaactaggcggaatcaacaacattctggtaccacatcaa
cgaccatccgtgttccagcagcctgtcatattcctgggagctgatgtcacacacccacca
gctggagatggcaagaaaccctccattgctgctgttgtaggcagtatggatgcccaccct
agtcgttactgcgccactgtacgtgttcagagacctcgacaggagatcattcaagacctg
gcttcaatggttcgcgaacttctcatccagttttacaaatcaactcgctttaagcccaca
cggattatattttaccgggatggtgtttctgaggggcaattccgtcaggtgttgtactgt
gaactattggcaattcgagaagcctgtatcagcctggaaaaggactatcagcctggcatc
acatatattgttgtgcaaaaacgtcatcacactcgtctgttctgtgctgataagaatgag
agggttgggagaagtggaaatattccagcaggaacaaccgtggacacagatatcacccac
ccatatgaatttgatttttatctttgcagccatgctgggatacagggtacgagtcgcccc
tcacattatcatgttttgtgggatgacaactgcttctctgcggatgaacttcagctccta
acctatcagctatgtcacacttacgtgcgctgcacacgctctgtttctatcccagcacca
gcctattatgcacatctggtggcatttagagcaagataccacctggtggacaaagagcat
gacagcgctgaaggtagtcacatttctggacagagtaatggacgtgacccacaggctctc
gccaaggctgtgcagatccaccaggacaccttacgcacaatgtacttcgcttga
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