Scyliorhinus canicula (smaller spotted catshark): 119967655
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Entry
119967655 CDS
T11175
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00280
Valine, leucine and isoleucine degradation
scau00650
Butanoate metabolism
scau01100
Metabolic pathways
scau04146
Peroxisome
Module
scau_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
119967655 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
119967655 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119967655 (hmgcll1)
Enzymes [BR:
scau01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
119967655 (hmgcll1)
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Gene cluster
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
119967655
NCBI-ProteinID:
XP_038656388
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All DBs
Position
6:complement(174123383..174301212)
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AA seq
336 aa
AA seq
DB search
MGNVPSTIKECLSSGLNRDWLSTGDTLLALGLQNNVTPALPEFVKIVEVGPRDGLQNEKV
IVPTEVKIKLINLLSETGLSVIEATSFVSPKWVPQLADHTEVMRGIKKCPKVCYPVLTPN
LHGFHAAIEAGAKEVAIFGAASETFSKVNTNCSIEESMLRFEEVIRSAKDGNIPVRGYVS
CAIGCPYEGNITPAKVAEVAKRMYSMGCYEISLGDTTGIGTPGNVKKMLEAVMKEIPKSA
LAVHCHDTYGQALANVFVALQMGISVVDCSVAGLGGCPYANGASGNVSTEDVVYMLSGLG
IRTGIDLSKLMEAGHYICKALDRKTNSKVAQACYKP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgttccctcgaccatcaaagaatgtctgagcagcggcctgaacagggactgg
ctctccactggagacactctgctcgctttaggactgcagaacaatgtcacaccagccctt
cctgaatttgtaaagatagtggaagttggaccgagagatggtctacagaatgaaaaggtg
attgtaccaacggaagtaaaaattaaattgatcaaccttctgtcagaaacgggcttatct
gtcatagaagccaccagctttgtatctccaaaatgggtgcctcagttagccgatcacaca
gaagtcatgcgaggtataaagaagtgtccaaaagtatgttaccctgtattaacaccaaat
cttcatggctttcatgcagcaatcgaagcaggtgcgaaggaagtggctatttttggggca
gcttcagagacgttcagtaaagtgaacactaattgttccattgaggaaagcatgctgcgg
tttgaggaggttatcagatcagcgaaagatggcaacattccagttcgagggtatgtgtcc
tgtgcaataggatgcccgtatgaaggaaacattacaccagctaaggttgcagaggtggcg
aaaagaatgtatagtatgggctgctatgagatttctctgggggacacgactgggatagga
actcctggcaatgtgaagaaaatgctggaagcagtgatgaaagaaatcccaaaaagtgcg
ctcgctgttcattgccatgacacatatggccaggctctggctaacgtctttgtagcttta
cagatgggaatcagtgtagtggattgctctgttgctggactaggtggctgcccttatgct
aacggtgcttccggaaacgtttcaacagaagatgttgtgtatatgctgagtggcttgggt
attcgcacgggaatagacttaagcaagttaatggaagctggtcactatatctgcaaagca
ctggacaggaagaccaactccaaagtagcccaggcctgttacaagccatga
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