Scyliorhinus canicula (smaller spotted catshark): 119967881
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Entry
119967881 CDS
T11175
Name
(RefSeq) beta-1,3-galactosyltransferase 5-like
KO
K03877
beta-1,3-galactosyltransferase 5 [EC:2.4.1.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00601
Glycosphingolipid biosynthesis - lacto and neolacto series
scau00603
Glycosphingolipid biosynthesis - globo and isoglobo series
scau01100
Metabolic pathways
Module
scau_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
119967881
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
119967881
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119967881
Glycosyltransferases [BR:
scau01003
]
Glycan extension
Type 1 chain
119967881
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Glyco_transf_10
Ribosomal_L35Ae
Cas_Cmr5
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
119967881
NCBI-ProteinID:
XP_038656896
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All DBs
Position
6:219025374..219051598
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AA seq
317 aa
AA seq
DB search
MKRFLAASCFKLLRKNKFILFLVPSLLTLIILGYLSQYRAVYLHVAKLSDHSFLMLPNSS
CQTRPPFLVLLVTSAQDQLVARSAVRQTWGRVRTAHGQRVVTYFLLGYSREHQEQLQKES
SLHKDIIQKNFTDSYYNLTLKVLMGLEWVNRFCPSVSFVMKTDSDMFVNVDYLTELLLRM
NHKDIFTGFVMRNFGPDRNNSSKWYISEQEYPQEKYPPFCSGTGYVMSADVANRVWNISR
IVPYFKLEDVYIGLCLAELKIDPVEIHSEEKFFNWKVPFSVCKFRKLITVHQVNPSELLI
YWKAMEDTADKHCPGDV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatttcttgctgcaagttgtttcaaattgcttcgaaaaaacaaatttattttg
tttttagttccctcattactaacattaattatacttggatatttaagccagtacagggct
gtctatttgcatgttgcaaagttaagtgaccactccttcctcatgttgccgaatagcagc
tgtcagacccggcccccattcctggtcctcctggtcaccagtgcccaggaccagttagta
gctcgctcggccgttcgccagacgtgggggagagtgaggaccgcccacggccagagggtg
gtgacctacttcttgctggggtacagccgagagcatcaggaacagctgcagaaagagagt
tcactgcacaaggacatcatccagaaaaatttcactgacagttattacaacctgaccctc
aaggtgctgatgggcctggaatgggtgaaccgattctgtccgtccgtatccttcgtgatg
aaaaccgattccgacatgtttgtgaacgtggattatctgaccgagctcttgttgcgaatg
aatcacaaggacatcttcaccggattcgtcatgagaaattttgggcctgataggaacaat
tccagtaaatggtacatcagtgagcaggaataccctcaggaaaaatatccaccattctgc
tccggcactgggtacgtgatgtcggccgatgttgccaatcgagtctggaacatttccagg
atcgtcccctactttaaactggaggacgtctacatcgggctgtgcttggcggagttgaag
attgatccagtggaaatccactcggaggagaagttcttcaattggaaggtgccgttttct
gtttgcaagtttcgcaaactcatcaccgtgcaccaggtgaatccctccgagctgctgatc
tactggaaagcaatggaagatacagcagataagcactgccctggagatgtgtga
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