KEGG   Scyliorhinus canicula (smaller spotted catshark): 119967896
Entry
119967896         CDS       T11175                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03082  ATP-dependent chromatin remodeling
scau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119967896
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119967896
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:scau01009]
    119967896
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scau03021]
    119967896
   03036 Chromosome and associated proteins [BR:scau03036]
    119967896
Protein phosphatases and associated proteins [BR:scau01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119967896
Transcription machinery [BR:scau03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119967896
    SWI/SNF complex
     119967896
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    119967896
   PBAF complex
    119967896
   SWI/SNF complex
    119967896
SSDB
Motif
Pfam: SNF5 DUF1679
Other DBs
NCBI-GeneID: 119967896
NCBI-ProteinID: XP_038656921
LinkDB
Position
6:complement(224254271..224267993)
AA seq 193 aa
MEIDGQKLRDTFTWNMNEKLISPEMFAEILCDDLDLNPLNFVPAVASAIRQQVESYPMDS
ILEDQTDQRVIIKLNTHVGNILLVDQFEWDMSERDNSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPIVESALRNTTDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPSW
NT seq 582 nt   +upstreamnt  +downstreamnt
atggaaatcgatggccaaaaactgcgagacaccttcacctggaacatgaacgagaagctg
atttcgcccgagatgtttgctgagatcctctgcgatgacctggatttgaacccgctgaac
ttcgtgcctgccgtggcttcggccattcgccagcaagtggagtcttaccccatggacagc
atactggaggaccagactgaccagagggtcatcatcaagctcaacacgcacgtcggcaac
atcctgctggtggaccagttcgagtgggacatgtcggagagggacaactcgcccgagaag
tttgcactgaagttgtgctcggagctgggcctgggcggggagtttgtcaccaccatcgcc
tacagcattcgtgggcagctgagctggcaccagagaacgtacgcgttcagtgagaatccg
ctgccaattgtcgagagtgcgctccggaacaccaccgacgctgaccagtggtgccccctg
ctggagacgctgaccgatgccgaaatggagaagaagattcgcgatcaggacagaaatacc
aggcgaatgcgacggcttgccaacaccgcccccagctggtaa

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