Scyliorhinus canicula (smaller spotted catshark): 119968706
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Entry
119968706 CDS
T11175
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119968706
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119968706
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119968706
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119968706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
119968706
NCBI-ProteinID:
XP_038657234
LinkDB
All DBs
Position
7:1760869..1814504
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AA seq
690 aa
AA seq
DB search
APGGNPRRQFTRQTPSFALDSIHTSSVFCLGGFSQEELLKIWKGIFYCMWMQDKPVLQEE
LANSISQLIHTFKNLDAKFLFMETFFQTMNREWNGIDRLRLDKFYMLIRLMLRQFLEVLK
SMSWDDSVVSRFLSCVTSEVLNPVSNTAVSGIRFHFIDIYLQELATVGAQQLSAEQNLKF
IDPYCRIAAKTKDRVLFHVVSQGIFEMIADQAPFAIEDLMNELQCDEQESSVCEELNSNI
EEEGPATVKMPPNINGSTPEKGDEMLKLDGEGENPNQSGYDDDIGPVLQFDYAALADRLF
QLSSKGSTPAQNRKRLYKLVKKFRDLAEGIFPQDDFPEELSTDEDDEDFCRRKRKKKQRL
ENDFEQKQEGVDKNKAGKGQKRKCLVAGRRSVSDRIDEPVLENGKDSNPRELLPVRVKKK
KSRAVKMMPLSDPVSGDTSEINIGTREESACGEPLSTALLDDQLLASDVDFETLVTKPKR
GRKRQNPHSNGSLLPDELTPTGPVVGKKVKKMLVKLRKLQAKKQSGGEQPSPSQAPGRRK
RKEKGLCEEPSSSKKLKIKNSGDAEPCVGIKTLNTTNEFLKFKSTPIPKPIFFKKAKSAE
PHPKRCKLIKVMSTSSAKKVRFGLKKNMTAEFKRTDKSILVSPEGTSRIAFDPQQKPHHG
VLKSNSAANSPATLWTKRSARGRPPTMDFL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gcccccggaggaaacccacgcagacagttcactcgccaaactccttcttttgcactcgat
tcaattcacacaagttctgttttttgtttaggtggtttcagccaggaggagttactgaaa
atatggaagggcatcttctactgcatgtggatgcaggacaaacctgtcttacaggaagaa
ttggcaaattccatttcccagctcatacacacgttcaaaaatctggatgccaagttcctt
tttatggagacattctttcagacgatgaatcgggagtggaatggaatcgatcgtctccgc
ctggataaattctacatgcttatccgcttgatgctgaggcagtttttggaggtattgaag
agcatgagctgggatgacagtgttgtcagccgttttctaagctgtgtgacaagcgaggtg
ttaaatcctgtcagcaacacagcagtcagtggaatccgcttccatttcattgacatctac
ctgcaagaactggcaacagttggtgcgcagcagttgtctgctgaacagaacctgaagttt
attgatccttactgtcgaattgctgccaaaaccaaagatcgagttttgtttcatgtcgtc
tcgcagggaatcttcgaaatgattgcagaccaggcaccttttgctattgaggatttaatg
aatgaacttcagtgtgatgagcaggagagcagtgtatgtgaggagcttaattcaaacatc
gaggaggaaggcccagccacagtgaaaatgccacctaacataaatggttccacacctgaa
aaaggtgatgagatgctgaaactggacggagagggcgagaacccaaatcagtctggatac
gatgacgatatcggccctgtcctccagttcgactatgcagcacttgctgatcgattgttc
cagctgtctagcaagggaagcactcctgcccagaacaggaagcgtctctacaagttagtc
aaaaagttccgggatttagctgaaggaatctttccgcaagatgatttccctgaagaactg
tcaacagatgaggatgatgaagatttttgtaggagaaagagaaagaagaaacagagactg
gaaaatgattttgagcagaagcaggaaggagtggacaaaaataaagcaggaaaaggacaa
aagagaaagtgtttggtggcaggacgtcggtcagtcagcgacaggattgatgagccagtg
ctggagaacgggaaagattctaatccccgagagctgttgcctgtgagggtgaagaagaaa
aaatcaagagcagttaaaatgatgccattgagtgacccagtcagtggtgatacgtccgag
attaacattgggacacgggaggaatctgcctgcggggagcctctgagtaccgctctgctg
gatgaccagcttctggcatcggatgtagactttgaaaccctagtaaccaagccaaagagg
ggaaggaagcgacagaatccacactcgaatgggagtcttttgccggacgagttgacaccc
actgggcctgtcgtcggtaaaaaagtaaaaaaaatgcttgtgaagcttcgaaagctacaa
gccaagaagcagtctggtggtgagcaaccctctccaagccaggcaccaggcaggagaaag
aggaaggagaagggactctgtgaggaaccaagctcaagcaaaaaactaaaaatcaaaaac
agtggtgatgctgaaccttgtgttggaatcaagactttgaatacaaccaatgaatttctg
aagttcaagagcactccaataccaaaacccatcttcttcaaaaaagccaaaagtgctgag
cctcatcccaaacgctgtaaactgattaaagtcatgtcaacttccagtgcaaagaaagtc
cgcttcgggctgaagaagaatatgacagcagagtttaaaaggaccgacaaaagtattttg
gtgagcccagagggaacttctcggattgcgtttgatcctcagcagaagcctcatcacggg
gtgttaaagtccaactcagcagcaaacagtccggccaccctctggacaaagcggtcagca
agggggcggcccccaaccatggacttcctctga
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