Scyliorhinus canicula (smaller spotted catshark): 119968809
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Entry
119968809 CDS
T11175
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119968809 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119968809 (runx1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
119968809 (runx1)
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Paralog
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GFIT
Motif
Pfam:
Runt
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
119968809
NCBI-ProteinID:
XP_038657551
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All DBs
Position
7:complement(26786703..26972809)
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AA seq
236 aa
AA seq
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MASNSIFESFPSYQQCFMRDTNTSRRFTPPSTTLSTGKMSDSLPLASPESALSKLRATDR
SMVDVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVLAGN
DENYSAELRNATAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKIT
VDGPREPRMNIRETNRFQIKIQVTSQSNHRTEVKVIAINGNWVVADSPTQGSSLYT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatatttgagtcatttccttcatatcaacagtgcttcatgagagat
accaacaccagccgccggttcacgccgccctccaccacgctgagcacggggaagatgagc
gactctctcccgctggcatcgccggagagcgccctgagcaagctgcgagccaccgatcgc
agcatggtcgacgttttagccgatcatcccggagagctggtccggacggacagtccaaac
ttcctctgctccgtcctcccgactcactggaggtgcaacaaaaccctccccatcgcattt
aaggtggtcgccctgggggatgttcctgacggcaccctggtcacggtcctggccggcaac
gacgagaactattcggccgagctgcggaatgccacggcagtcatgaaaaaccaggtggcc
cgcttcaacgacctgcgattcgtcggacggagtggccgaggtaaaagtttcacgttgacc
atcacagtgtttacaaacccgcctcaagtagccacttatcacagagccatcaagatcacc
gtggatggacccagggaaccaagaatgaacatcagagaaaccaacagatttcagataaag
attcaggtcacctcccagtcaaaccacagaactgaagtcaaagtgatcgctataaacggc
aattgggtggtggcagattcaccaacacagggctctagtttgtatacttga
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