Scyliorhinus canicula (smaller spotted catshark): 119968891
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Entry
119968891 CDS
T11175
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119968891 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119968891 (alcama)
04090 CD molecules [BR:
scau04090
]
119968891 (alcama)
Cell adhesion molecules [BR:
scau04515
]
Immunoglobulin superfamily
Other
119968891 (alcama)
CD molecules [BR:
scau04090
]
Proteins
119968891 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
V-set
I-set
ig
C1-set
Ig_5
Ig_PDGFR_d4
Ig_4
Cupredoxin_1
TMEM154
DUF4232
Insulin_TMD
DUF5957
Syndecan
SoxE_N
Motif
Other DBs
NCBI-GeneID:
119968891
NCBI-ProteinID:
XP_038657759
LinkDB
All DBs
Position
7:40281668..40621834
Genome browser
AA seq
642 aa
AA seq
DB search
MCWEHYFSKLAHLFNRIFSALKLRGTEIVKGLDLLFSAPGYCSFLEWHFEACDINFLKFT
QQGQRKALLHLFLLLSAQAMTTVTAMVGDTITLKCEANRNNKITLVSWRMKLSDAGIEQL
ISLTPATDIITNKEVPGYKDRITMNEDFSLSISNVGIQDEKIFSCFTLVESDIDEVSVSL
KVYKIPSIPKILEPVAFLEEGNLQQVGVCVVNNSYPAANITWQYNFQNLDANNPAVKIKR
NTVRNEKDYYNTRSSLKYMSKKGEGEVSFTCTATYFEDPNNIASKTSSPLTVLVHYKTSK
VLLQVTPAQDVEEGTNVTLTCVGDGYPPPDKFIFMKNGEEKEVNTMEYELINVSREDTGE
YSCTQQDNPDIKDAVNITVHYLTLTMNPDEDVTKMVGENITVECIAESSGTEDVTLMKRN
KGCANPFITESLQYTHSGTYTCSAKIKEVKEMKREKTVNVRVEGKPRINKLTKKVVNNAK
VISCVVEGFPQPTVQWSINGTAPREEPVKDKKSQWNHRITVKPSENITVTCTAINSHGED
QDTVNLTAMRFKEPLDETLEQDPSDPNNKNDNSKGNGDQAKVIVGVIVGLLLAAVIAGVA
YWLYKKKSPTSKTKTNERGTADEIKKINKGDNNHTTAGSSAV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgggaacactatttctccaaattagcccatttattcaataggatattttctgca
ttgaagttgagaggaactgaaatagtgaaaggcctggaccttttgttcagtgcacctgga
tactgctcctttctggaatggcattttgaggcttgtgacattaatttcctaaagtttact
cagcagggccaaagaaaggcactgctccacctgtttctcttgctgtcagcacaagcaatg
accacggtgactgcaatggttggagatactataacactgaaatgtgaagcaaatagaaac
aacaaaataaccttggtatcatggagaatgaaattaagtgatgctggcattgaacaacta
atttcacttacaccagctaccgatataataacaaacaaagaggtccctggatacaaggac
aggataaccatgaatgaggacttctccttaagtatctctaatgttgggattcaggatgaa
aagatattttcttgcttcaccctggtggaatcggacatagatgaagtttcggtctcactc
aaagtttacaaaataccatctattcctaaaattctggaaccagttgcattcctagaggaa
gggaatctacagcaggttggtgtttgtgttgtgaacaacagctatcctgctgccaacatc
acctggcagtacaattttcagaatctggacgctaacaatccagccgtgaagattaagcgt
aacactgttagaaatgaaaaagattactacaacacacgatcttctctgaagtacatgtca
aagaaaggggagggagaagtttcttttacctgcactgcaacttactttgaggacccaaac
aacatagcatccaaaacatcttcgcctctcaccgtgcttgtacactacaaaacttcaaag
gttttattgcaagtgaccccagcacaagacgttgaagaagggacgaatgtcacactgacg
tgcgtgggtgacgggtatcctccaccagacaaattcatcttcatgaaaaatggggaggaa
aaagaagtcaacacaatggagtatgaactgattaatgtgtcgcgagaggataccggtgaa
tactcgtgcactcaacaagataaccctgacataaaggatgctgttaacatcactgtgcac
tacttgaccttgactatgaatcctgatgaagatgtcactaagatggttggggaaaatata
accgtggaatgcattgctgagtcttccggaactgaggatgttaccctgatgaaaagaaat
aagggttgcgcaaatcccttcataacggagtcactgcagtacacgcattctggtacttat
acttgctcagccaaaataaaggaagtgaaggaaatgaagagagaaaagacagtgaatgta
cgagtagaaggaaagccaaggataaataaattgacaaagaaggttgtgaacaatgctaaa
gtgatcagctgtgttgtggaaggatttccccaacccactgtgcagtggagcatcaatgga
acagctcctagggaagaaccagtaaaggacaaaaaatcacaatggaaccacaggataaca
gtaaagccttcggagaacattacagtcacctgcacagccataaactcccatggagaggat
caagatacagtcaatctaactgccatgcgattcaaggaaccattggatgaaactctcgaa
caagatccttcagacccaaacaataagaatgacaacagcaaaggcaatggtgaccaggcc
aaggtgatagtgggagtcatcgtaggcctactattagctgcagtcatcgctggggtggct
tactggttgtacaaaaagaaaagcccaacatctaaaaccaaaaccaatgaaagaggcact
gctgatgagatcaagaagataaataaaggagataacaaccacacaacggcgggttcctca
gctgtataa
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