Scyliorhinus canicula (smaller spotted catshark): 119968914
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Entry
119968914 CDS
T11175
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119968914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119968914
03021 Transcription machinery [BR:
scau03021
]
119968914
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119968914
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119968914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Ntox15
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
119968914
NCBI-ProteinID:
XP_038657821
LinkDB
All DBs
Position
7:44259110..44508226
Genome browser
AA seq
779 aa
AA seq
DB search
MADGASKDEKPESRMSNPSESIKPSLDGSEGSTGAQTNGLDFQRQPIPTGGPLTTAQAQA
LLGQLHQVNYMSDVTNRCLYVQLAGTTLQPTASQTLNLQVKSEESGDSSSQQTTTQPSLQ
PSLQTTLPQTQLMLAGGQITGLTLTTAQQQLLLQQAQAQLLAAAVQHSANQQHNTTGTAI
SATAATPMAQIPITQPIQIQDLQHLQQQNLNLPQFVLVQPGHPITTNLQPTQFIISQTPQ
GQQGLVQAQNLLQQLPQQSQANLLQSQPNITFSTQPATPTRTTIATTPIQSVQQSQSTPK
RVDTPNIEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL
NLSFKNMCKLKPLLEKWLNDAENLSVDSALSNPSSLASPGLGIEGLSRRRKKRTSIETNV
RVALEKSFLENQKPTSEEIMMIADQLQMEKEVIRVWFCNRRQKEKRINPPSSNSGTTTST
KTIYHNPASMVASTSNLVTSSTPTTLAVNAMQMPVSSAGVTNFSISGTTASGTAPTNVAS
VITGLSSAVSTSSVTSPSLTPSPSASVSVTESSSSSDAHTTQSTSTGLINPLCTSQIMVS
ASGLQATALQAAAAQVSSGAGLATNPGLAAMAAAAGLANPGLMSAPQFAAGGALLSLNPG
SLGGALGPALMSNSTLATIQALASSGTLPITSLDASGNLLFANAANPGGTPNIVTAPLFL
NPQNLSLLTSNPAVSLISAAGTTGHAASLQMASMSADSNQNSSFTVTSAGGATNTTKAQ
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggagcgtccaaagatgaaaagccagaatcgagaatgagcaatccgtcagag
tctatcaagccttccttggatggcagtgaagggagcacaggtgcccaaacaaatggactg
gatttccagcggcagcccatcccaacaggaggcccactcacaacagcacaggctcaggcc
ttactgggacagctgcaccaggttaactacatgtcagatgtgacgaacagatgcttatat
gtgcaacttgctggaacaactttgcagccaactgcttcacaaacattaaatttacaggta
aaaagtgaagaatcgggggattcttcatcccagcaaacgacaacccagccttcactgcag
ccatctttacagaccacccttccacagacccagctcatgcttgctggagggcagatcact
gggctcacgttgacaacagcgcagcaacagttgttactccagcaagcacaggcccagctg
ctggctgctgcagtccaacattcagcaaatcagcagcataataccacgggaactgccatc
tctgccacagcagcaactcctatggcacaaatacccatcactcaaccaatccaaatacaa
gatctgcaacatttacagcaacagaacctgaatttgccgcagtttgttctggtgcagcct
ggtcacccaatcaccaccaacctgcagccgacacagttcatcatctcacaaacgccacag
gggcaacaaggtctcgtacaagcccagaaccttctacaacaactacctcagcaaagccaa
gccaacctcctgcagtctcagccaaacatcactttcagcacgcagccagcaacaccgaca
cgcacaacgatagcaacaactcctatccagtcggttcagcagagccagtcgacaccaaag
cgcgtagatactccaaacatagaggaacctagtgatcttgaggaacttgaacagtttgcc
aagacgtttaaacagagacgtatcaaacttgggttcactcagggtgatgtaggacttgcc
atgggaaaactctatggaaatgatttcagccaaactacaatctctcgttttgaagccttg
aacctcagctttaagaatatgtgcaaactcaaaccattgcttgaaaagtggttgaatgat
gcagaaaatttgtcagtagactctgcgctgtcaaatcccagctccttggcttcaccgggt
ctgggaatcgaagggctgagccgcaggagaaagaaacgcaccagcatagagaccaatgtt
cgagtggccttagaaaagagtttcctggagaaccaaaagcctacctcggaggagatcatg
atgattgccgatcagctgcagatggagaaggaggtgatccgagtctggttctgtaacagg
cggcagaaggagaagcggattaatccacccagcagtaatagtggcactacgacttctacc
aaaacaatttatcacaatcccgcctccatggtagccagcactagtaacctcgtgacaagt
agtacacctactactctggctgtaaatgcaatgcagatgcctgtatccagtgctggtgtg
accaacttcagcatttcaggtacaactgcatcagggacagctcctacaaacgtggcatct
gtaatcaccggcttatcttctgcagtttctacgtcatcagtcacttctccatctctaacc
ccttcaccatcagcatctgtttcggtgactgagtcatctagcagtagtgatgcacatacc
acacagtcaacctcaactggcttaataaaccctctgtgcacaagccaaatcatggtgtca
gcatctggactgcaggccactgcgctacaagcagcagctgcacaggtatccagtggtgct
ggccttgccaccaatccgggcctagctgccatggctgctgctgcaggactagccaatcct
ggcctcatgtcagcccctcagtttgcagctggaggtgccttactaagtctgaatccaggg
agtcttggtggtgctctcggtccagcattaatgagtaatagcacactggcaactattcaa
gcacttgcatctagtggaacacttcctataacctcccttgatgccagtggaaatctattg
tttgccaatgcagcgaacccagggggtactccaaacatcgttacagcccctctttttttg
aacccacaaaacctctccttactcaccagcaacccagccgtaagcctgatatccgccgcc
gggacaactggacatgcagccagtctccagatggcctctatgtcagctgattccaaccag
aactcttcgttcactgtgacctcagcaggtggggccaccaacaccaccaaggcccaatga
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integrated database retrieval system
