Scyliorhinus canicula (smaller spotted catshark): 119968930
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Entry
119968930 CDS
T11175
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119968930 (stxbp5l)
Membrane trafficking [BR:
scau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119968930 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119968930 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
119968930
NCBI-ProteinID:
XP_038657862
LinkDB
All DBs
Position
7:complement(46423044..47144304)
Genome browser
AA seq
1264 aa
AA seq
DB search
MKKFNFRKVLDGLTAASSPAHSGSGGGGGLGSGTGGGGGAGSGGSGAASGGGGGGSAMGG
GRGGAGDSEVPESLASEHFQICKTVRHGFPCQPTALAFDPVQKVLAIGCRTGALRILGRP
GVDCYCQHDSGAAVLQLQFLINEGALVSACADDTLHLWNLRQKRPAILHSLKFNRERITC
CHLPFQSKWLYVGTERGNTYLVNIESFVLSGYVIMWNKAIELCTKTHPGPVVHLSDSPRD
EGKLLMGFESGTVVLWDMRSKRADLRFYYDEAIHSVSWHHEGRQFMCSHSDGSLTLWNLK
NPSKPFQIIVPHGKAQRDGKKPEPCKPILKVDHRTSRYSEPFIIFSGGLSYDKACRRPSL
TIMHGKSVTVLEMDYPIVDFLVLCETPYTNEFQEPYAVVVLLEKDLIVVDLTQSTFPIFE
NPYPMDVHESPVTCSEYFADCPPDLIPALYSVGAKQQKKQGYSTKEWPIGGGTWNLGAQT
YPEIIITGHADGSLKFWDASAITLQVLYKLKTCKVFEKQKVKDAKQIAEIVEEDPYAIQM
ISWCPESRIFCVAGISAHMIVYRFSKHEVTAELVTLEMRLQYEVEDIVTPEPDSIPPITD
TSSQLSPSTNPALSGSANALTPEGGKDNIPCLKVKTRPVKMAPGYQVNLVIQLVWMDGEP
PQQITCLAVSSAFGLVAFGNCNGLAVVDFMQKTILLSMGTIELYGTSDPFQRQLKSPRKS
KQLNAGLAEFVDSPVSLEIERCKSPTSVKGPRKLSLPTDLKTDLGSVKSSCVEGKTSVSR
NSVKFFEKTRTIYEDHINGVCTSPISQPCNTGKRLSIADTSKLNRRGPGRPPFRKAQSAA
CMEISLPVTHTEGHTSRRAMLQQLHGISIFSHDEHHASSYSWSEKESKENSVNRSRSSSV
SSIDKESKEAITALYFMESFSRKMDSTLSPCLWVGTSLGTVLVISLNIPPEEQRHSEPLM
VSPSGTVLMLKGALLTFCSLDSLGALIHPPYEVWRDPNSEDKDDKGRKRKLVTFSPSSSQ
EMGDHQYVVLCSEKQAKVYSLPSQSCVYVHNITETSFVLRADMVTMCNSICLACFCANGH
IMTLSLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCENLQ
EMLGDLFIPIETPEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASRTLAQHIPGPGGL
EGVKGAASGVVGDLARARIALDERGQRLGELEDRTAAMMSSAETFSKHAHELMLKCRDKK
WYQF
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttccgaaaggtgttggacggtttgacagccgcgtcctcgcccgct
cactccggcagcggcggtggtggtgggctcggatctgggacaggcggcggcggtggcgct
ggaagcggaggcagtggcgctgccagtggcggcggcggcggcggcagtgccatgggcgga
gggagaggaggagctggggactcggaggtaccggagtcactcgcatcagagcacttccag
atctgcaagacggtgcgtcatggtttcccctgtcaaccaactgccttggcttttgatcca
gtgcaaaaagtcttggctattggctgccgcacaggagcactacgaatactaggccgtcct
ggtgttgattgctactgtcaacatgatagtggagcagctgtattgcagcttcagttcctg
atcaatgagggagctttagtaagtgcttgtgcagatgacacacttcatttatggaacctt
cgacaaaaacgtccagcaatccttcattcactcaaattcaatcgagaacggattacctgc
tgccatctccctttccagagtaaatggctgtacgtgggcacagagcgaggaaatacatat
cttgtgaacatcgaatcttttgttctatcaggatatgttatcatgtggaataaagcaata
gaactgtgtacaaaaactcaccctggccctgttgttcatttaagtgacagtccaagagac
gaggggaaactgctcatgggatttgaaagtggaacagttgtattgtgggacatgaggtca
aaaagggcagatttacgattttattacgatgaggcaatccattctgtcagctggcatcat
gaagggagacagttcatgtgcagccattcagatggtagtttaaccctatggaacttgaaa
aatccaagcaaaccttttcagatcatagtaccacatggaaaagcccagcgggatgggaaa
aaacctgagccatgtaaaccaatcctaaaagtagatcataggacgtctagatatagtgaa
ccatttataattttttctggaggactctcctatgataaagcgtgccgaagacccagcctg
acaattatgcatggcaaatccgttacagttctagaaatggattatcccattgtggacttc
ctagttctttgtgaaacaccgtatacaaatgaattccaagaaccatatgcagttgttgta
ctacttgaaaaagatttgattgtagttgatcttacacaaagcacttttcctatctttgaa
aatccatatccaatggatgtgcacgagtctccagtgacttgctctgagtattttgctgat
tgccctcctgatttgatacctgcactttattccgtgggagctaaacaacaaaaaaagcag
ggatatagcacaaaggaatggccaattggtggtggtacatggaatttgggtgcacaaaca
taccctgaaatcatcataactgggcatgcagatggctcactgaaattctgggatgcttct
gccataactcttcaagtattatacaagctgaaaacctgcaaagtgtttgagaagcagaaa
gtgaaagatgcaaagcagattgcagagattgtagaagaggatccctatgctatacagatg
atcagttggtgtccagagagcagaattttctgtgtcgcaggcatttcagcacatatgatt
gtttacagattcagcaagcatgaagttactgctgagttagtgactctggaaatgcgatta
caatacgaagttgaagatattgttactcctgaaccggactctataccaccaatcaccgat
acttcttcacagctttccccctcaacgaatccagcattatctggtagtgcaaatgcatta
acaccagaaggaggaaaggacaacatcccatgtctcaaggtgaaaactcgacctgtcaaa
atggctcctgggtaccaggttaaccttgtcattcagctggtctggatggatggagagcca
cctcaacaaatcacatgcctagcagtaagctctgcctttggccttgtggcatttggaaac
tgtaatggtttggctgttgtggattttatgcaaaagaccattctactcagcatgggaacc
attgaactttatggtacaagtgacccatttcaacgacagcttaaatctccccggaaaagc
aagcagctcaatgcaggtttggctgaatttgtggatagccctgtatcgttggaaattgaa
cgctgcaaatctcctacatcagtaaaaggaccaagaaagttaagtctgccgacagatctt
aagactgatctcgggtctgtgaaaagttcctgtgtagaagggaaaacatctgtttcaagg
aactctgtgaaattttttgagaagactagaaccatttatgaagatcacatcaatggagtc
tgcacaagccctatttcccaaccatgcaacactgggaagcgcctttccattgctgatact
tcaaagctgaaccgtcgcggaccaggccgaccaccttttcgaaaagcacaatcagctgcc
tgcatggaaatttcattgcctgtcacccacacagaaggccacacttccagacgggcaatg
cttcagcaattgcatggcatcagtattttctcacacgatgagcatcatgcttcctcatat
tcatggagtgagaaagaaagtaaagaaaattctgttaaccggtcccgaagttccagtgtc
tccagcattgacaaagaatcaaaggaagctataactgctctgtactttatggagtccttc
agccggaagatggactctaccctctcaccatgtctatgggttggcaccagtttgggtacg
gttctagtcatctccttgaacatacctccagaggaacaaaggcattctgaaccactcatg
gtctctcccagcggaacagtgttaatgttgaaaggagcactactaacattttgctccttg
gattctctgggtgctttaatacaccccccatatgaagtgtggagggatccaaacagtgaa
gataaagatgataaaggacggaaaagaaaactagtaacattttcaccttcttcgtctcag
gaaatgggggatcaccagtatgtagttctgtgctcagagaaacaggccaaagtttattct
cttccatctcaaagctgtgtgtatgtacacaacatcacagagacttcctttgtgttacgt
gcagatatggtaactatgtgcaacagcatctgcctggcttgcttctgtgctaatggacat
attatgaccctaagcttgccaagtcttcgcccattgttggatgtaaactacttgccttta
actgatatgagaatagcacggacattctgttttacaaatggtgggcaagctctgtatcta
agctccccaacagaaatccagcgaattacttacagccaagaaatgtgtgaaaaccttcag
gaaatgcttggagatttgtttattcctattgaaaccccagaagctcaaaacagaggcttc
ttaaaggggctgtttggaggaagcggacaaacatttgatagagaagagttatttggtgag
gcttcagcaggcaaggcatctcggactcttgcccagcacatccctggaccaggtggactt
gaaggtgttaagggtgctgcatctggagttgtgggcgatcttgctcgtgctcggatagct
ttggatgaacgtgggcaaagactgggcgaactggaagaccgaactgcagccatgatgtcg
agtgcagagacattctctaaacatgcgcatgagttgatgctgaaatgcagagataagaag
tggtatcaattctga
DBGET
integrated database retrieval system
