Scyliorhinus canicula (smaller spotted catshark): 119969010
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Entry
119969010 CDS
T11175
Name
(RefSeq) syntaxin-2-like
KO
K08486
syntaxin 1B/2/3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119969010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119969010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119969010
Membrane trafficking [BR:
scau04131
]
SNARE
Syntaxin (Qa)
Stx-PM
119969010
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
119969010
Exosomal proteins of other body fluids (saliva and urine)
119969010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
T2SSF
Ly-6_related
Tlp
DUF6584
DUF16
DUF6480
DUF1771
DUF6442
Motif
Other DBs
NCBI-GeneID:
119969010
NCBI-ProteinID:
XP_038658090
LinkDB
All DBs
Position
1:complement(4109817..4210576)
Genome browser
AA seq
288 aa
AA seq
DB search
MKDRLEDLQSHKENYEDEVTITLEKEHFMDGFFHQVEEIRGCIDRIAENVEEVKKKHSII
LSAPNPEGKTKEELEELTVSIKSTANRVRNKLKIIEQSIKDEDDENQGSVNLRIRKTQHS
TLSRKFANVMTEYNEIQITFRERSKGRIQRQLEITGKATTDEELEEMLESGNPSIFTSDI
ISDTQITRQALNEIESRHKDIIKLEASIRELHDMFVDMAMLVEQQGEMINNIETNVVNAT
EYIERAKEETKRAVRYQSKARRKMFYIMICVVVLLVIIAIIIGVTVPS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccggctggaagacctgcagtcgcacaaagagaattatgaagatgaagtgacg
atcactttggaaaaggagcactttatggatgggttcttccatcaggttgaagaaatccgc
ggatgcattgaccgtattgctgaaaatgtggaagaagtgaagaagaagcatagcattatc
ctatcagcaccaaacccggaagggaaaaccaaagaagaactggaagaacttaccgtctca
atcaagagcactgccaacagggtccgaaataagctaaagatcatagaacaaagcattaaa
gatgaagatgatgaaaaccaaggttcagtaaatttaagaatacgcaaaacgcagcattcg
actctgtcccggaagtttgcaaatgttatgactgagtacaacgagattcaaatcaccttc
agagagcgcagcaaaggacggattcaacggcaacttgagatcactggcaaggcgaccact
gatgaagaactggaagaaatgttagaaagtggcaacccatctatcttcacatctgatatc
atatcagacactcagatcaccagacaagctcttaatgaaattgaatcacgccacaaagac
attatcaaactggaagcgagcattcgagagttgcacgacatgtttgtggacatggccatg
ttggtggaacagcagggtgaaatgattaacaacatcgagacaaatgtggtgaacgctact
gaatatattgagcgggcaaaagaagagactaaaagagcggttcgataccagagcaaagca
aggcggaaaatgttctacatcatgatttgcgttgtggtcctcttagtcattattgcgatt
atcataggagtaactgtcccatcctag
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