Scyliorhinus canicula (smaller spotted catshark): 119969058
Help
Entry
119969058 CDS
T11175
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119969058 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scau03032
]
119969058 (pola1)
Enzymes [BR:
scau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119969058 (pola1)
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
119969058 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
119969058
NCBI-ProteinID:
XP_038658169
LinkDB
All DBs
Position
7:74545686..74919225
Genome browser
AA seq
1502 aa
AA seq
DB search
MGPEREAGSEPEQQASQDGADSCSLATTRSKRNRKEKGGRVAALERLKKAKAGEKIKYEI
EKISNVYEELDEDQYSKLVCERQDDDWIVDDDGIGYVEDGREIFDDDLEEDVFNAKNKGK
EKSNANKDKKNVRNMMVSKPNNIKSMFLASATKKKAEKDVDLTKDDLLGDILQDLHAEAS
SQPAPPPAVVLKRRKPAGVSANPFSVKPPTHKPQASPVLRSNHQNNSVRKTVVAEEVASI
VDSVQPVSSSVKQMTVKQEGKRAESVEKRDRLEAVIVKEELAEDDPCAMEFNEGDFDEPM
ETESVSTAEIEMKPEKSNQVEEPKEEDKPSVNSTFTESSCWDHMDQGENNSVVLEVQVDA
GRLPLVTGSEGDQVFRFYWVDAYEDQYHQPGVVYLFGKVWIESAKTHVSCCVSVRNIERT
VYLLPRETRMNLKSGKDTETPVTIMDVYQEFSEAFSEKYKIMKFKSKKVQMNYAFEIPDI
PTHCDYLEIKYAADLPQLPSDLKGETFSHVFGTNTSSLELLLLNRKIKGPGWLELKAPQL
PNKPMSWCKVEAVALRLDHVTVVKDIPPPPLVILSVSMKTVQNSKTHQNEIVVLAAFVHH
KFPLDRAAPQPPFQAHFCVISKPSDCIFPYDFREVLARKNAKVEVAATERTLLGYFLAKI
HKIDPDVLVGHDIYGFDLDVLLQRINVCKVPHWSKIGRLRRSAMPKLGGRGGFVEKNAAC
GRLICDIEISAKELIRCKSYNLTELVHQVLKTERVTIPAENIRNLYNTSLHLMHLLETTW
MDTKCILQIMCELNVLPLALQITSIAGNVMSRTLMGGRSERNEYLLLHAFHEKNYIVPDK
HSFKKHVQESVDDDEEYVDGGAGSTGKIKKGRKKAAYAGGLVLEPKVGFYDKFILLLDFN
SLYPSIIQEFNICFTTVERTAANSQKNLGANEMEEIPEVPDQDQEMGILPKEIRKLVERR
RQVKQLMKQADLNPDLHLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTLKGRE
ILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKQYKLLELDIDG
VFKSLLLLKKKKYAALVIEPIADGRYVTKQELKGLDIVRRDWCGLAKEIGNYVISQILSD
QPRDTIVENIQNKLTEIQQSVVNGSVPQSQFEINKALTKDPQDYPDKKSLPHVHVAMWIN
SQGGRKMKAGDTISYIICQDGSNLSASQRAYAPEQLQKQETLTIDTQYYLAQQVHPVVAR
ICEPIDGIDSALIATLLGLDPSQFRIHHQYLKDEENDALLGGPTQLTDEEKYRDSERFKF
VCPKCGTENIYDNVFDGSGQQIQPSLLHCSNIDCEALPVQYEVQMRNKLTLDIRRHIKRY
YSGWLICEEPTCQNRIRHLPLNFSRSGPVCQACTKATLKQEYPDKALYTQLCYYRYIFDW
DYALEKVLSEQDKGFVKKHFGTKDHGVVFKSLKGVVDDALASSSYSEVNLCKLFQAFSAI
NK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgggtccggagagggaggctggaagcgagcctgaacagcaggcttctcaagatggtgct
gactcttgtagcttggcaacaacacgctcgaaacgtaatcgcaaagagaaaggaggacga
gtagcagcgctggaacgcctgaagaaggccaaggctggcgagaaaataaaatatgagatt
gaaaagatctcaaatgtttatgaggaacttgatgaagatcagtattccaaactagtatgt
gaacgacaggatgacgactggatagttgacgatgatgggattggttatgtggaagatggt
cgtgaaatttttgatgatgatttggaggaagatgtctttaatgcaaaaaacaaagggaaa
gaaaagtccaatgccaataaagacaagaaaaatgttaggaatatgatggtttcaaaaccc
aacaacatcaaatctatgtttttggccagcgcgaccaagaaaaaagctgagaaagatgtt
gatctgaccaaggatgatctactgggagatatacttcaggatcttcatgcagaggcatct
tcacaacctgcgccaccacctgctgtagttttaaagaggaggaagcctgctggggtatca
gcaaatccattttctgtcaaaccacccacccataagcctcaagcttctccagtcctccgt
tctaatcaccagaacaattctgtgaggaaaacggttgttgctgaagaagtggccagcatt
gtggattcagtccagcctgtgagttcctccgttaaacagatgactgtgaagcaagaagga
aagagggcggaatcggtagaaaaaagggaccgtctggaggctgtgatcgtaaaagaagaa
ctggctgaagatgacccctgtgcaatggagttcaacgagggagactttgatgagcccatg
gaaactgaatctgtctccactgcagaaattgaaatgaaacctgaaaaaagcaaccaagta
gaagagcccaaggaggaagacaagccatctgtaaactctaccttcactgaatcctcttgc
tgggatcatatggaccaaggtgaaaataattctgtggtgcttgaggtgcaggtagatgca
ggtcgtttgccattagtaactggttcagaaggagatcaggtattcagattctactgggtg
gatgcatatgaagaccagtatcatcaaccaggagtcgtatatctctttggcaaagtgtgg
attgaatcagcaaagacccatgtcagctgctgcgtgtctgtgagaaacattgagcgcaca
gtatacctgttgccacgggaaacgcgcatgaatctgaaatctggcaaggatacagagaca
cctgtaacaataatggatgtttatcaggaattcagcgaggcgttttctgaaaaatataaa
ataatgaagttcaaatcaaagaaagtgcagatgaattacgcttttgaaattccagatatt
cctacacactgtgactacctggagatcaaatatgcggctgacctgccgcaacttccttct
gacttgaaaggggaaaccttttctcatgtgtttggcaccaatacatcaagtcttgaactt
ctgctcctgaataggaagatcaagggaccaggctggttggaactcaaggctccacagctt
cccaataaacccatgagttggtgcaaagtagaggctgtggcactgcgactagaccatgtg
actgtggtcaaagatattcctcctcctcctcttgtcattttatcagtcagcatgaagact
gtgcagaactccaagactcatcagaatgagattgtggtcttggcagctttcgttcatcac
aaattccctctggacagagctgctccccagcctccattccaggcccatttctgcgtcatc
agcaagcccagtgattgtatctttccttacgatttccgggaggtactggcgagaaaaaat
gcaaaagttgaggttgctgctaccgaaaggaccctcttaggctatttcttggcaaagatt
cacaagattgaccctgatgttcttgtgggccatgatatttatggatttgatctcgatgtt
ctgctgcaacgaattaatgtctgcaaagttcctcactggtcgaaaattggtcggttaagg
agatcagctatgcctaaacttgggggtcgtggtggatttgtggaaaagaatgcagcgtgt
ggcaggctgatttgtgatattgaaatttctgccaaggagttgatccgatgcaagagttac
aatttaactgagttggttcatcaggttctcaaaacagagagggtgaccattccagctgag
aacattcgcaatctttataatacctctcttcatctcatgcacctacttgagactacatgg
atggatacaaaatgtattctacagatcatgtgtgaattgaatgttcttcctttggcactg
caaataaccagcattgctggaaatgtcatgtcacgaacgctaatgggaggccgttcagag
agaaatgaatatttactgctgcatgctttccatgaaaaaaactacatcgtacctgataaa
cattctttcaagaagcatgtgcaggagtctgtagatgatgatgaagaatatgttgatgga
ggagctggaagtacagggaaaattaagaaaggtcgaaaaaaagcagcatatgctggtggt
ttagtcttggaacccaaagttggtttctatgataaattcatattgctgcttgacttcaat
agcttgtatccttcaatcattcaagaattcaatatctgtttcacgacagtagagagaacc
gctgcaaattctcaaaagaatctgggggctaacgaaatggaagaaattcctgaagtacca
gatcaagatcaggagatgggtattttgcccaaagaaattcggaaactggtagagaggcga
cgccaggtcaaacagctgatgaagcaagcagacttaaatcctgatcttcatctacagtat
gatatccgacaaaaggctctgaagcttacagctaacagtatgtatggctgtctgggattc
tcctacagcaggttctatgcgaagccacttgctgctttggtcaccctcaaaggaagagag
attctcatgcacaccaaggagatggtccagaagatgaaccttgaagttatttacggagac
acggattccataatgataaataccaacagcacaaacctggaggaggtcttcaaactagga
aacaaggtcaagagtgaagtaaacaagcagtacaaacttctagagctagacatcgatggt
gtgtttaagtcgctgctgctgctgaagaagaagaaatatgctgccctcgtcatagaacca
attgcagatggacgctatgtcaccaaacaggaattaaagggactggatattgttaggcga
gattggtgtggcctagcaaaggaaattggaaactatgttattagtcagattctgtctgat
caacctcgggacacaatagtggagaatatccaaaataaactaacggagatccagcagagt
gttgtgaatggcagtgtgcctcagagccagtttgaaattaacaaggctttgacaaaggat
ccccaagattacccagataaaaaaagcttgcctcatgtccatgttgccatgtggataaat
tcacaaggtggacggaaaatgaaagccggggacacaatctcctacatcatttgtcaagac
ggctcaaacctgagtgccagccagcgagcctatgcaccagagcagctgcaaaaacaggag
accttgactatcgacacacagtactacctcgcccagcaagtgcaccctgtcgtggctcga
atctgtgaacccatcgatgggatagactctgcactgattgctaccttgttgggtctggat
ccatcccagtttcgaattcatcaccaatatcttaaagatgaagaaaatgatgccctgttg
ggtggcccaacacagcttactgatgaagaaaaatatcgtgattcagagaggttcaagttc
gtgtgtccaaaatgtggaacagaaaacatttatgataatgtatttgatggaagtgggcag
cagatccaacccagtttacttcactgcagtaatattgattgtgaagcgttgcctgttcag
tatgaagtacagatgcgtaacaagctaactttggacatccggcgacatatcaaaagatac
tacagtggatggctcatttgcgaagaaccgacttgccagaatcgcattcgtcaccttcca
ctgaatttctctcgaagtggcccagtatgccaggcttgtacaaaggctacactaaagcaa
gagtatcctgataaggccttatacacccagctatgttattaccgctacatatttgactgg
gattatgcattggaaaaggttctttcggaacaggataaagggtttgtgaagaaacacttt
ggtactaaagatcacggtgttgtgtttaagagcctaaagggagttgtagatgacgcactg
gcttccagcagctactccgaggtgaacctctgcaaactcttccaggcattcagtgcaatc
aacaaatga
DBGET
integrated database retrieval system
