KEGG   Scyliorhinus canicula (smaller spotted catshark): 119969213
Entry
119969213         CDS       T11175                                 
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03082  ATP-dependent chromatin remodeling
scau03083  Polycomb repressive complex
scau04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119969213
   03083 Polycomb repressive complex
    119969213
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119969213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scau03036]
    119969213
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119969213
  Histone modification proteins
   HAT complexes
    HATB complex
     119969213
   HDAC complexes
    Sin3A-HDAC complex
     119969213
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119969213
    PRC2.2
     119969213
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119969213
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119969213
  Chromatin remodeling factors
   NuRD complex
    119969213
   NuRF complex
    119969213
   NuRF complex (fruit fly)
    119969213
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 119969213
NCBI-ProteinID: XP_038658445
LinkDB
Position
7:complement(97890900..97946720)
AA seq 428 aa
MVRMADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEG
KDYSVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK
EGYGLSWNPNLSGHLLSASDDHTICLWDISAGPKEGKIVDAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPA
SELESQGS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggtgagaatggcggataaagaggtttatgacgacgcagtggaagagcgtgtgatcaat
gaagaatataaaatatggaagaagaatactccatttctgtatgatttggttatgacacat
gcattagaatggccaagtcttactgtacaatggcttccagatgttaccagacctgaaggc
aaagactatagtgttcatcgtttggttctagggacacatacatctgatgaacagaaccat
ttggtcattgcaagtgtccagatccccaatgatgatgctcaatttgatgcttctcactat
gacagtgagaaaggagaatttggtggatttgggtccgtaagcggaaaaatagaaatagaa
attaaaatcaatcatgaaggtgaagtgaaccgagcacgttatatgccacagaatccatgc
attattgccaccaaaactcccacctctgatgtgcttgtctttgactacaccaagcatcca
tctaagccagatccaagtggtgagtgtaatcctgatctgcgactgcgtggtcatcagaaa
gaaggatatggactttcctggaatccaaatctaagtgggcatcttctcagtgcttcagat
gatcatactatctgtctttgggatattagtgcaggtccaaaagaaggaaagatagtagac
gctaaaacaatctttacaggccacactgcggttgtagaagatgtctcctggcatttattg
catgaatccttgtttggatctgtggcagatgaccagaaactcatgatctgggacacaagg
tcaaataacacttcaaaacctagccactctgtggatgcacacacagctgaagtcaactgt
ctgtccttcaacccatacagtgaatttatcctagcaactggctctgctgacaagacggtg
gcattgtgggaccttcgaaatctcaagttaaagctccactcctttgagtcacacaaggac
gagatcttccaggtgcaatggtctccacacaatgaaactatccttgcctccagtggtaca
gatcgtcgcctcaatgtttgggatttgagtaaaattggcgaggaacaatcagccgaagat
gcagaggatggacctccagaactattgtttattcatggaggacacactgcaaagatttct
gatttctcctggaatccaaacgaaccatgggtaatctgttctgtatcagaagacaatata
atgcaagtttggcagatggctgagaatatttacaacgatgaagaaccagatacacctgcc
tctgaacttgagagccaaggatcataa

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