Scyliorhinus canicula (smaller spotted catshark): 119969235
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Entry
119969235 CDS
T11175
Name
(RefSeq) putative claudin-24 isoform X1
KO
K06087
claudin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03272
Virion - Hepatitis viruses
scau04382
Cornified envelope formation
scau04514
Cell adhesion molecule (CAM) interaction
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119969235
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119969235
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119969235
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119969235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119969235
04147 Exosome [BR:
scau04147
]
119969235
Cilium and associated proteins [BR:
scau03037
]
Other cilia and associated proteins
Stereociliary proteins
119969235
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119969235
Exosomal proteins of colorectal cancer cells
119969235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
DUF4153
Motif
Other DBs
NCBI-GeneID:
119969235
NCBI-ProteinID:
XP_038658503
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All DBs
Position
7:103719243..103830803
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AA seq
300 aa
AA seq
DB search
MYHPRLSASSAPDKSFAYIYSPRKEEQMSRDSSDFTQFALTGVSEQPSWNEKSLTCTFIE
PCGTETTFSGVAVELDRPSERHRVTEMRSNLCLYQRAAFFLSLLGWVCSLVTAMLQQWLI
MNSDLVQTETFSIGIWETCVAQDDGPVQCKGYDSFLGLPDDIKLTRILMCTSIVLGLLGL
FFSLSGSASITCFSDNETTKERLAVSGGIFCLLAGTTTFAPVTYIAHMTVVKFWDNAIPS
FVPRWEFGPALFVGWAGAFFLLLGSLLQITSQCCFQKSTGNIQLKPPIVKRASWYKTEYV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacccaagactttcagcttcgagtgctccagataagagcttcgcgtacatatac
agcccaagaaaagaagagcaaatgtcaagagactccagtgacttcactcaatttgccctg
actggtgtttcagagcagccatcttggaatgagaaaagcctgacatgcacatttattgaa
ccatgtggcacagaaaccacattctcaggtgttgccgtggaacttgacagaccttcagaa
agacacagggtcactgagatgaggtcaaacctttgcctatatcaacgtgcagcctttttt
ctatcgcttcttggatgggtgtgctccttggtaacagcaatgctgcagcagtggctaatt
atgaactctgacttggtacagacggagacattctccattggaatctgggaaacatgtgtt
gctcaggacgatggtccagtccagtgcaaggggtacgatagcttcctcggcctgccggac
gatattaagctgactcgaattctcatgtgcacgtccattgtactcggcttgctgggtttg
ttcttctccctctctggatcagcctccatcacctgcttcagtgacaatgagaccaccaag
gagaggctggcagtcagtgggggaatcttctgcctactggcgggaaccacgaccttcgcc
cctgtgacctacatagcccacatgacggtggtcaagttctgggataatgccatccccagt
tttgtcccacgttgggagtttggcccagctttgtttgtcggttgggccggggccttcttt
ctccttcttgggagtcttctacaaatcacgtcacaatgctgcttccaaaaatccacgggc
aacatccagctgaagccaccaatcgtgaagagagcttcatggtataaaacagaatatgtc
tga
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