Scyliorhinus canicula (smaller spotted catshark): 119969378
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Entry
119969378 CDS
T11175
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04145
Phagosome
scau04540
Gap junction
scau04814
Motor proteins
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119969378 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
119969378 (tubb1)
09142 Cell motility
04814 Motor proteins
119969378 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119969378 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119969378 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119969378 (tubb1)
04147 Exosome [BR:
scau04147
]
119969378 (tubb1)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
119969378 (tubb1)
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
119969378 (tubb1)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119969378 (tubb1)
Exosomal proteins of colorectal cancer cells
119969378 (tubb1)
Exosomal proteins of bladder cancer cells
119969378 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
119969378
NCBI-ProteinID:
XP_038658872
LinkDB
All DBs
Position
7:complement(131197038..131210532)
Genome browser
AA seq
448 aa
AA seq
DB search
MREIVHVQIGQCGNQIGAKFWEVICEEHGIDLKGNYIGDLDVQLERINVYFNEAHDRKYV
PRAILVDLEPGTMDSVRGSRIGRIFRPDNFIYGNSGAGNNWAKGHYTEGAELVENVLDIM
RNECESCDCLQGFQLTHSLGGGTGSGMGTLIMSKIREEYPDRIMNSFSVVPSPKVSDTVV
EPYNATLSIHQLIENTDSTFCIDNEALYDICFRTLKLATPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRSLTVPELTQQMFDPRNMM
AACDPRHGKYMTVAAIFRGRMSTKEVDEQMLAIQTKNSSHFVEWIPNNVKVAVCDIPPCG
LKMSSTFMGNNTAIQELFKRITEQFSVMFRRKAFLHWYTGEGMDEMEFTEAECNTNDLVA
EYQQYQDATADLEEEEDEMEESETEPTK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatagtacacgtgcaaattggccagtgtgggaatcaaattggggccaagttc
tgggaagtaatttgtgaagaacatggaattgacctcaaagggaattacattggagacttg
gacgtccaacttgagaggatcaatgtgtatttcaacgaggcacatgatagaaaatatgta
cccagggcaattctggtggacctggagcctggaacaatggacagtgtccgtggtagtcgc
atcggacgcatcttcagaccagataacttcatttatggtaattcaggcgctgggaacaac
tgggccaaaggtcattacacagaaggtgctgagctggtagaaaatgtgctggacatcatg
aggaacgagtgtgagagctgtgactgtttacaaggcttccagctcacccactcactggga
ggaggaacaggttcaggcatgggcactctcatcatgagcaaaatcagagaggaataccct
gatagaattatgaatagcttcagtgtcgtaccttcgccaaaggtttcagacactgtggtc
gaaccgtacaatgccaccttgtccattcaccagctgattgagaacacagactcaaccttc
tgcattgacaacgaggctctgtatgacatttgtttccgaacattgaagttggccacacca
acttacggtgacctgaaccatctggtttccatgacaatgagtggtgtcaccacgtccctg
cgtttccctggtcaactcaacgcagacctgaggaagctagcagtcaacatggtcccattt
cctcgcttgcatttcttcatacccggatttgctccactgacatcacgtggcagccagcag
taccgctcattgacagtgccggagcttacgcagcagatgtttgatcccaggaacatgatg
gcggcctgcgatcctcgccatggcaagtacatgactgtggcggctatcttcaggggcagg
atgtccactaaggaggtagatgagcagatgttagccatccaaaccaagaacagcagccat
tttgtggagtggattcccaataacgtcaaagtggccgtgtgcgacattccaccgtgtggg
ctcaaaatgtcttccaccttcatggggaacaacactgccatccaggaactcttcaagcgc
atcactgagcagttctcagtcatgttcagaaggaaggcttttctgcattggtacacggga
gaaggtatggatgagatggaattcactgaagcagaatgcaacaccaacgatctggtggct
gaataccaacaataccaagatgccaccgcagatcttgaagaggaagaggatgaaatggaa
gaaagtgaaacagaacctaccaaataa
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