Scyliorhinus canicula (smaller spotted catshark): 119969529
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Entry
119969529 CDS
T11175
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PDZ_6
PH
PH_10
Acyl-CoA_ox_N
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
119969529
NCBI-ProteinID:
XP_038659172
LinkDB
All DBs
Position
7:complement(169626106..169899642)
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AA seq
1648 aa
AA seq
DB search
MDEESHQENGVESGKDTDRQLRLRVCVMNEILKTERDYVGSLKFLKSSFLHRNHQNDADK
SEKQITEEHLKILFSNIEEILDVHMLFLAALESRLQPEPQPQHELGNIFLQFKDRFCVYQ
EYCSNHEKALRLLMELNKIPEVRAMLLNCMVLGGMKTTDIPLEGYLLTPIQRICKYPLLL
KELLKRTPKKHSDNSAVEKALQAMKAVCTNINETKRQMEKLEALEHLQSSIEGWEGSNLT
DICTELLQQGPLLKISAGNIQERVFFLFDNLLVYCKRKSRVAGKKSTKRTKSINGAQYIF
RGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIHNTAKNKWFVLMAKTAEEKQKWLDAI
LKEREQRESLKLGMERDAYVMISEKGEKLYHMMMSRKGNLIKDRRRKLSIVQKCFFGSEF
VSWLMEIGEISKAEEGVNLGQALLENGIIHHVSDKHHFKNEMVLYRFRYDDGTYKPRSEM
EDIMSKGVRLYCRLHCLFIPVVKDRDHHLKTYKSVIPASKLVDWFLMQGDCQTREEAVTL
GVGLCNNGFMHHVLEKSEFKDESQFFRFYADEEMEGTSSKNKQLRNDFRLVENILVKSLL
IFPEEECYGFEIEEKNKIIVVKSVQSGSSAEIAGLQVGRKIYSINEDLVFLRPLLEVETI
LNQFHCSRRPLRVLIATKPKEIIKVPDTLEGLGFQIRGAAPPFVHAVLKGSGAAAAGLLP
GQCILKVNGNNVSKENYTDVLDHFSAYRKNPPHFLGTNSSQWIYRTVEDVDERTQRKLSS
DCLCSISGLSLHDKLLDGSASQTKAFDHIIENKQEADLQSNTDGVTSHINMTVDNVHLEH
GVVYEYVSTAGIKCHVKEKMVEPKGCFNLTAKILEALAADDRQFVKNCRGLISSRNSLIF
KPQFEFKHLCETKLGTIGKRIANYSKFAQELKNSAWPSFKQASTKLHLLNSTDFCPTNCH
VNVIEVSCPKSTTSLGRSFSIRFGRKSSFLGLEQDQGIINPMNYTRHSITTMAAPQWKCL
IVREGETDSQLQPDELANQQNGEVTQESGGLSFLLKQEDLEIQDSFFQLFIKLEISSKEM
KQYVMQINALLSSITEPAQSETEHTSSDLSLTPSILIEENDIDKAEHCGTKRVCFVVNEE
EQDDSGHDTTSYRDSYSECNSNRDSVLSYTSDRSRSSYLGSDEMGSGDELPCDMRISLDK
QDKLHGCLEHLFNQVDSIDALLKGSVMARAFEETNGISTEYNIQEFRQKVDRNIKCRSII
QTNVQEDPWNLPCSINALVDNVQEYVEDGKNQLLLALLHCTDLELQLRRDVLFCQSLVAA
ICTFSEQLLAALNHRYNNNGEYEEESKEASKKWLEQIAVTGVLLNFQSLLSANVKDERIM
LEDTKVALSDLDNVTFCFRQLEHEYPVANSSITYHVDGSRQALKVIFYLESHNFAELPSK
FQNGGNLKLHTVLFTQALENQCSPENVSAEEFQQQINSASLEKVKHYYRKLRAFYLERSN
LPSDSSTTAVKINQLLRPLNALEELRRLMELSIGPKHSTSSVSSSSSASGIATLPISSEL
CNRLGACQIVMCSTGIQRSTLSVTLEQAVILARSHGLLPRCIMQATDIMRKQGARVENSA
KNLKVMDQMPQSVPRLYRLCQPPSDGDL
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaagtcaccaagaaaatggagtggagagtggaaaagacaccgaccggcag
cttcgtttacgagtttgtgtgatgaatgagattttaaaaaccgagagggactacgtgggg
tccttgaaatttctaaagtcttcattcctgcatagaaatcatcagaatgatgcagacaag
tcagaaaagcaaatcactgaagaacatctcaagatactattttctaacattgaggagata
cttgacgtgcatatgctgttcttggcagctcttgagagtcgcctacaaccagagccacaa
cctcagcatgaacttggaaatatcttccttcagtttaaagaccgattttgtgtctatcaa
gaatattgcagcaaccacgaaaaagccttgagacttttaatggaattgaacaaaatacct
gaagtgcgggcaatgcttttgaattgcatggtactaggaggtatgaagaccacggatatt
ccattggaaggctatttgttaacaccgatacagagaatatgcaaatatccgctgctactg
aaggagttgctaaaacggacccccaaaaagcacagcgataactcagcggtggaaaaggct
ttgcaagcaatgaaagctgtgtgcacgaatattaatgaaacaaagaggcagatggaaaaa
ctggaagcactggaacatttgcagtcgtcaattgaaggatgggagggttcaaatttgaca
gatatatgcaccgaactgctgcaacaaggacctttgttaaagatctcggccggaaacatt
caggagcgagtgttctttttgtttgataatttgctggtgtactgcaaaaggaagtctagg
gttgccggtaagaaatcaacaaagcgcaccaagtctataaatggagcccaatacattttc
cgtggcagaattaacaccgaggtgatggaagtggagaatgttgaagatggaacagctgat
taccatagcaatggctatactgtaacaaatggttggaagatccacaatacagctaaaaat
aaatggtttgtcttgatggccaaaactgctgaagagaaacagaaatggctggatgcaatt
ctgaaggaacgggagcagagagagagtctcaagttgggcatggagcgtgatgcgtatgtc
atgatctcggagaagggagagaagctctatcacatgatgatgagcaggaaaggaaatctt
ataaaggaccggaggagaaagctgtctattgtccaaaagtgcttttttggcagtgagttt
gtttcctggctgatggaaataggagagatcagtaaagccgaggaaggcgtgaatctgggt
caagcgttgcttgagaatggcatcattcatcatgtttctgacaagcaccatttcaaaaat
gagatggtactgtacagattccggtatgatgatggaacctacaaacctagaagtgagatg
gaagacatcatgtctaagggtgtgagactgtactgtcgattgcactgcctcttcattcct
gtggtaaaagaccgagatcaccacctgaaaacctataagtctgtgataccagcaagcaag
ttggtcgattggttcctaatgcagggcgactgccagaccagagaggaagcggttacactc
ggcgttggactgtgtaataatggcttcatgcatcatgtgcttgagaaaagcgaatttaag
gacgaatcccagttttttcgcttttatgctgatgaagaaatggaagggaccagctccaaa
aacaaacagctgcggaatgacttcagattggttgaaaacatccttgttaaatcccttctg
attttccctgaagaagagtgttacggatttgaaattgaggagaaaaataagatcattgtg
gtgaaatctgttcaaagtggctcttctgcagagatagcaggacttcaggttggaaggaag
atttactccatcaatgaggatttggttttccttcggccacttctggaagtggagacaatt
ttaaatcagttccattgcagtcggaggcctctgagggtgctgattgcaacaaaacccaaa
gagataatcaaggttcctgacactttggaaggacttggcttccagatacgtggagctgcc
ccaccatttgttcatgcagttctaaaagggtccggggctgcagcagctgggcttctccct
ggacagtgtattctgaaagtaaatgggaataatgtcagcaaagagaactacactgatgta
cttgaccacttcagtgcatacagaaagaatccaccgcactttctgggaacaaattccagt
cagtggatatacaggactgtcgaagatgtggatgagagaacacaaagaaagctcagctct
gattgtctttgcagtatttctggtctatcattgcatgataagctgttagatggctcagcc
agccaaacaaaagcatttgatcatatcatcgagaacaaacaggaggcagacctgcagtcg
aacactgatggcgtgacctctcatatcaacatgactgtggataatgtacatttggagcat
ggtgttgtctatgagtatgttagtacagcaggaataaaatgtcacgtcaaggaaaaaatg
gtggagcccaaaggatgtttcaatttaactgcaaagattttggaagctttagctgcagat
gaccgtcagtttgtaaagaattgcagaggattgatatcttccagaaattcccttatcttt
aagcctcaatttgaattcaaacatctgtgtgaaaccaagctcggcaccattggcaagcga
attgccaactattccaagtttgcccaggagttgaaaaacagcgcatggccctccttcaag
caagcttctaccaaattgcacctgttaaacagcactgacttctgtccaaccaactgtcat
gttaatgtaattgaagtgtcctgtcccaaaagtactacctctctgggaagatctttcagc
atacgctttggtcgaaaaagttctttccttggcctggaacaggatcaaggtattataaat
cctatgaattacactcggcacagcattaccaccatggcagcaccccaatggaagtgtttg
attgtgagagagggagaaaccgactcacagctgcaaccagatgagttggcaaatcaacaa
aatggagaggtgacccaagaaagtggaggcttgagttttctattgaagcaggaagatctg
gaaattcaggactctttcttccagctttttattaaactagagatttcttccaaggagatg
aagcaatacgtaatgcaaataaatgccctgctgtcctccataactgagcctgctcagtct
gagactgagcacacttcatcagacctctcacttaccccatctatcctgatagaagaaaat
gatattgacaaagcagaacactgtggaacaaagagagtctgcttcgttgtgaatgaagaa
gagcaggatgactccggacatgatacaacaagttacagggattcctatagcgaatgtaac
agcaaccgagactcggtgctgtcctataccagtgaccgcagcaggagctcctatctgggc
agcgatgaaatgggatcaggcgatgagctgccttgcgacatgagaatttctcttgataag
caggacaaattgcatggctgcctcgagcatctttttaatcaggtggattccattgatgca
ctcctcaaggggtcggttatggccagagcctttgaagagacaaatggcattagtacagaa
tacaacatacaagagtttcgacagaaagttgaccgaaacataaaatgtcgaagcataatc
caaacaaatgtgcaggaggacccctggaacttgccttgttcaatcaatgccttggtggac
aatgtacaggaatatgtggaagatgggaagaatcaattgcttttagctctacttcattgc
acagacctggagttacaattgcgtcgagatgtgctcttttgtcaaagccttgtggcggcc
atctgtaccttttctgagcagttattggctgctttgaaccaccgctataacaacaatgga
gaatatgaagaggagagcaaagaggccagcaagaagtggcttgagcagatagctgttact
ggtgtccttcttaactttcagtctctgctttctgcaaatgtgaaagatgagcgcatcatg
ctggaagacaccaaggtcgctttgtctgatctggataatgtaacattctgtttcaggcaa
ctggagcatgaatacccagtagcaaacagctccatcacttatcatgttgatggaagccgg
caagcactgaaagttatcttttacctcgaaagccataactttgcagagttgccttctaag
tttcagaatgggggaaatttgaagctacacacagtgctattcactcaagctcttgagaac
caatgttctccagaaaatgtttcagcagaagaatttcaacaacagatcaattcagcctct
ctggaaaaagttaaacattattatcgaaaactcagggctttttatctagaaaggtctaat
ttaccatctgactcttctacgacagctgtaaagataaaccagctgctacgtcccctcaac
gcgttggaggaacttcgacgactgatggagttgtctataggcccaaagcattcgacatcc
tcggtgagctcaagcagttctgcttctggaatagcaaccttgccgatatcgtctgagctc
tgcaacaggcttggagcttgtcagattgttatgtgcagcactggtatacaaaggagtact
ttaagtgtaaccctggaacaagcagtgattttggctcggagtcatggacttttacctaga
tgtatcatgcaggccacagacattatgagaaaacagggtgcgagggttgaaaactcagcc
aaaaatttgaaagtaatggatcagatgccacaatctgtaccaagactataccggctctgt
caaccaccttccgatggagacttatga
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integrated database retrieval system
