Scyliorhinus canicula (smaller spotted catshark): 119969601
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Entry
119969601 CDS
T11175
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119969601 (soga1)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119969601 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119969601
NCBI-ProteinID:
XP_038659358
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Position
7:complement(180911708..181028754)
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AA seq
1740 aa
AA seq
DB search
MEAVNGAPEVQQQQVEKKRLHRAPSPARPKAIRGWSVAKSKCNPGSKPGLAQCRLSRHSP
ALKDGKLGKMPAGKAAAASASSSSRASKKPERGGGGLRGSAAGKRKGQRGGPAPAPGKLS
PASATDSSSELSDCPSEPLSEPGDGEPGPGPSHGCPTTPDALDEGTWPAEDASLASASGQ
SDAASGAKSPSLDSRLHVSNSLAFSDFSEEFVDSIQEEFLKEIEELRSENDYLKDEIEEL
RAEMLEMRDIYLEEDVYQLQELRQELDRANKTCRILQYRLRKTERRSLRVAQTGQVDGEL
IRSLEQDVKVSKDVSVRLHNELEAIEKKRIKLEEENEDLRQKLIEMDVSKQVLHNEVDKM
KESSLKKRGGRVATKPEKKPVLQEDSADLKCQLHFAKEEAAVMCKKLTKLVKDNENMREE
LVKYSSLYGDLDNAMTIGEIGESPHVREAELKLHLKLVEEEANILSRRTVELEVENRGLK
AEMDDLKGHGEKESSNQDIRLGITSTSYGEFGENVAELRRHLQFVEEEAELLRRSLIELE
DQNKHLMNELNRYKSESNQESTWSDSCPSLNEPSQEELMAARLQINDLNGKVKKLEYENR
VLVSNLQRYDLASYHCQKCSRELDTDISDSADISSSQPRREVPVGGETDSKETQERTSGS
GSSRIADNDDTAKLLGSKDLEILFSIKDQAELVTEVIDLLISDTSGLISDTKLCSTIDLP
NHSFNESNDEAANANDPKLMSSINSRLLGLKTELASVTEKIDRLGESIREESRGMSPLPH
LTESASFLSTMTTMSQDLPMDSVGKEYAADLTQPDFRDQVDWQQDVSHTLEICVTNADTK
EYRENSKEYTDKEYNIYSHEDSDSYATEVKELQLDLSEAKETIRGLQEQLVQERELRNEE
AVRFQQKMSQLKEEQQKALVRRDFELQSLNLQSRLEQKFWSQEKNLFVKEADQFKQNLFL
LYMKLKWFLKHWKCGKKMDNDGDDLLEVNSVKDLYLLIEEEELTPRQVDNKTVTSDDQSQ
KTFEEVLTVPVVKSVPTSCPKQSNEYSRVVGDIKMIVKDLCTELKEERRRTNDLQLQFAN
AKSTWEIEKVELKSCIAQLEGKAGKMTSEKAPGDLKTALKWEREEHQQLLAESYTAVMDL
TQQLQINEKNWSQEKLELLDRFNIERSHSEQRLKEMQHKINQMLQHRSSEKETSDELEAK
GTNLQRAKSVSSMSEFESLLDTSPYLPPTSAPLSNGLKDLEELNKKNWTHMNNEGELLHE
KSESTLIEQSDVEMPVISSWDFTMAANLVNPHLNTKQIQRSYTAPDRTGIRIYYSPPVVR
RMDGSVVQNNEEKIMIEPGFLFTMAKPKKMADSEPQSENACNKWFNDFSKHRDLLESGTG
EHQVSVSANTATTGFPSALHDLQISGNMSDDMKEVANCVRNVICTSSLERKVNTASQTVG
LISVGTQTARSISVGLQTESPRSISSALHRSWASRGSLLMPTQSSRSKQLSSSLEKVPTK
FERPCCSPKYGSPKLQRRSSSKIDHTRERSPWALSHRGQNESAWARSTTTRDSPVLSSIN
DGLSSLFNVVEHTSGNVDSVWKSSQHETKTKGDSSRYGIVQEFFRNVCGRSQSPTNGADK
PLKDPVIEENVRKEEFAAPAPAPVGHTQVDSISRIVNKRLPKQPNKEDQKPTSYPTPGAK
DPDTRDACGASGLLEETSCDCTSQSLTSCFPSRSSARHSLSQCKSRSLPSDPSMSDEKSG
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaacggagctccggaggtccagcagcagcaagtggagaagaagcggctg
caccgagccccctccccggccagacccaaggcgatccggggctggtcggtggccaaatcc
aaatgtaacccgggctccaagccggggctggcccagtgccggctgtcccggcacagcccg
gctctcaaggacggcaagctgggcaagatgccggcgggcaaggcggcggcggcctccgcc
tcatcgtcttcccgggcgagcaagaagccggagcggggaggcggcggcctgaggggcagc
gctgcgggcaagaggaaggggcagcgcggcggcccggctcccgctcccggcaagctgtcg
ccggccagcgccaccgacagcagctccgagctgtccgactgcccgtccgagccgctctcc
gagcccggggacggcgagccggggcccgggcccagccacggctgccccacgacccccgac
gccctggacgagggcacctggccggccgaggacgcctccctggcctcggccagcgggcag
tcggacgcggcgtcgggcgccaagtccccgtcgctggacagccggcttcacgtcagcaac
tcgctggccttctccgactttagcgaggaattcgtcgacagcatccaggaggaattcttg
aaagaaatagaggagcttcgctcggaaaacgactatctgaaggatgaaatcgaggagctt
cgagcagaaatgctggaaatgagggatatttatttagaggaagatgtttaccagctgcag
gaacttcgtcaagaactagacagagcaaacaaaacctgccggatccttcagtaccgactg
cgaaagactgaacggagaagcctaagagtagctcagacaggccaagttgacggggaacta
atccgaagtttagagcaagatgtgaaggtttcaaaagacgtgtctgtaaggcttcacaat
gaactggaagctattgagaagaaaagaataaagttagaagaagaaaatgaagatcttcga
cagaaactcattgaaatggacgtttccaagcaggtgttgcacaacgaagtggacaaaatg
aaagagagctctctgaagaaaagaggaggccgtgttgctactaaaccagagaagaagccc
gtgctacaggaggacagtgctgatctgaaatgccagctccactttgctaaagaggaagcc
gctgtgatgtgcaaaaagctgaccaaattagtgaaggacaatgaaaacatgagagaggaa
ttggtgaagtacagctctctttatggtgatttggacaatgcaatgactattggtgaaatc
ggagaatcccctcatgtaagagaagctgagctaaaactgcatctaaagttggtagaggag
gaagccaacattttgagcaggaggacagtggaattggaggttgaaaaccgtggattaaaa
gctgaaatggatgacctaaaaggtcacggtgagaaagaatcctcaaaccaggatatccgg
ctaggaattaccagcaccagctatggcgagtttggagagaatgttgcggaactccggcgt
caccttcagtttgtggaagaggaggcagagcttcttcggcgatccttaattgagttagag
gaccaaaataagcacctcatgaatgaactgaatagatacaaatctgagtccaatcaggag
tcaacgtggtcagatagttgtccatcattaaatgaaccttcccaggaagagctcatggca
gcaagactccaaatcaacgacctcaatgggaaagtcaagaaactggaatatgagaatcgt
gtgcttgtttcaaaccttcagcgttatgacttggcatcctatcattgccagaaatgttcc
cgagaacttgatacggatattagtgactctgcagatatttcttcatcccagcccaggaga
gaagtacctgttggaggagaaactgattcaaaggaaactcaagagcgaacctctggaagt
gggagcagcagaattgctgataatgatgatactgctaagttgttgggaagcaaagacctt
gagattctgttcagcattaaagatcaagctgaacttgttactgaagtcattgatctctta
atttcagacacaagtggcttaatttctgacaccaagctttgttcaaccattgatttgcca
aatcactccttcaatgaaagtaacgatgaagctgcaaatgccaatgatcctaaattaatg
agttccattaattcaaggcttcttggcttaaagacggagttggcatctgtcactgagaaa
attgaccgccttggcgaaagcatcagagaagaaagcaggggcatgtcccctttaccccat
ctaacagagtcggcgagctttctgtccacaatgacaacaatgtctcaggatttgcccatg
gattctgtagggaaagaatatgcagcggatttaacgcagcctgactttagggaccaagtg
gactggcagcaagatgttagccataccctggagatctgtgtgaccaatgccgacaccaag
gagtaccgggaaaattccaaggagtataccgataaggaatacaacatctacagccacgag
gacagcgactcctatgctacagaggtcaaggaactgcaacttgatttatctgaagctaag
gagactatccgagggctgcaggagcagcttgttcaggaaagggaacttcgcaatgaagag
gcggtgagatttcaacagaaaatgtcacagcttaaagaggagcaacaaaaagctcttgta
cgaagagattttgagctgcagagcctgaatttgcagagcagacttgagcagaaattctgg
agccaggagaaaaacctgtttgtaaaggaagctgatcagttcaaacaaaacctcttcctg
ctctacatgaaattgaaatggttcctgaaacactggaaatgcggcaagaagatggataat
gatggggatgatttactagaggttaacagtgtgaaagatttatatttgctgattgaagaa
gaagagctgacccctcgccaagtggacaataagacagtgacctcagatgatcaatctcag
aaaacctttgaggaggttttgactgttccagttgtgaaatctgttcctacgtcatgtcca
aagcagtcaaatgaatacagcagagttgtaggagacattaaaatgattgtaaaggacctt
tgcacagagttaaaggaggaaagaaggagaacaaatgatcttcagctccagttcgcaaat
gccaaatcaacctgggagatagaaaaggtggaactcaaaagttgcattgcacagctggaa
ggtaaggctggcaaaatgacctctgagaaagctccgggtgatctcaagacggctttgaaa
tgggagcgggaagaacatcagcagctcctcgcagagtcctacactgcagttatggatcta
acgcagcagcttcaaattaatgagaagaactggagtcaggagaagttagagttactggac
cgatttaacattgaacggagccacagcgagcagcgtttgaaggaaatgcaacacaagatc
aatcagatgctacaacacagaagcagtgaaaaggagacttcagatgaattagaggctaaa
ggaactaatttgcaacgggcaaagtcagtttcttccatgtctgagtttgagagcttgttg
gacacgtctccatatttacctcccacctccgcacccttgtcaaatggtttaaaggatctt
gaggagctgaacaagaaaaattggacgcacatgaataacgaaggggaattgttacacgag
aaatcagaaagcacattaatcgagcagtcagatgtggaaatgcctgtaatttcatcttgg
gacttcaccatggcagcaaatttagttaacccgcatctcaatacgaaacaaatacagagg
agttacacagcaccagacagaaccggcattcggatttattacagtccaccagtagtgcgc
agaatggatggctctgtggttcaaaacaacgaagaaaagataatgattgagccaggtttc
ctgttcacgatggcaaaacccaagaaaatggcagattcagagccgcaatcagagaatgcc
tgcaacaagtggtttaatgacttttccaagcaccgagatctgctggaaagtggtactgga
gaacaccaggtttccgtttcagctaataccgccacgactgggtttccttctgctctgcat
gatctacagatatcaggtaacatgagtgatgacatgaaggaggtagccaactgcgtcaga
aatgttatttgtaccagctcattggaaaggaaggttaatacggcaagtcagactgttgga
cttatcagtgttggtactcagacagcccgaagtattagtgttgggttgcagactgagagt
cccagatctatctccagtgctctgcaccggtcatgggcgtcgagaggctccttactgatg
ccaacccagagctcccgtagcaaacaactctcttcatctttggaaaaggtgccgactaag
tttgaacgaccttgctgttcgcccaaatacggctcgccaaagttgcagagaagaagctct
tctaaaatagatcatacaagagagcgaagcccatgggccctgtctcatcgaggtcaaaat
gagtcagcttgggctaggtcaacgaccacgagggatagtccagtgctcagttccatcaac
gatgggctgtccagcttgtttaacgtcgttgagcacacatctggaaatgtcgactcagtt
tggaaatcaagccaacatgaaacaaaaacaaaaggcgattcgtcaagatatgggattgtt
caggagtttttccgaaacgtgtgtggcagatcccagagtccaacaaacggagctgacaaa
ccattaaaagatcctgtaattgaggaaaatgtcagaaaagaagaatttgctgctccagct
ccagctccagtgggccacacacaggtagacagtatttccagaattgtaaataaaagactt
cccaagcagccgaacaaagaggaccaaaaaccaacatcctatccaaccccgggagctaaa
gatccagacacacgggatgcctgtggagcttctggtcttcttgaggaaacatcatgtgat
tgtacgtctcagtcactcacctcctgctttccatccagatcgtcagctcgccattcgcta
tcgcagtgtaaatcgcgttctttgccttcagatcccagcatgtcagatgaaaaatcaggc
tga
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integrated database retrieval system
