Scyliorhinus canicula (smaller spotted catshark): 119969613
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Entry
119969613 CDS
T11175
Name
(RefSeq) homeobox protein TGIF2-like isoform X1
KO
K19553
homeobox protein TGIF2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119969613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119969613
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119969613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
119969613
NCBI-ProteinID:
XP_038659403
LinkDB
All DBs
Position
7:complement(185540517..185560369)
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AA seq
261 aa
AA seq
DB search
MKAAKKAFTSSQRRPGDMTMSDSETGEDDGSLSSDMAHSKKRKRHVIFSKESVKILRDWL
YEHRLNAYPSEQEKLSLSGQANLTVLQVSNWFINARRRLLPDMLRKDGKDPLKFTISRKS
KSSELNPSRSVGGPNPLQNSALATSSTLLSASVRPSVICHATTSMVKDMPLLFCPDSGID
SKKTSKLIDQEVVRPLINTNNPTTLVTCTDSISPNNGLFNTPPPTPPELHQDFSGFQLLV
DVALQRAAELESQKQNIKISS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgcaaagaaagccttcaccagtagccagaggagaccaggggacatgaccatg
tcagacagcgagacgggagaagacgacggcagcttgtcttccgacatggcccattccaag
aagaggaaacgacatgtgattttttccaaagagtcggtgaagatcctgcgggactggctg
tacgagcaccggctgaacgcctatccatccgagcaggagaagctcagcctgtctggacag
gcgaatctaacagtattgcaggtttccaactggttcatcaatgcaaggagaagactttta
ccagacatgctgcggaaggatggcaaagaccctcttaaattcaccatttctcgcaaaagc
aagtcctctgaattaaacccatctcgaagcgtgggtgggccaaacccattgcagaattcc
gctttggctacaagctccactcttttgtctgcatctgttcggccttctgtcatctgccat
gctacaacatcgatggttaaagatatgcctttactattctgcccagactctggcattgac
agtaagaaaacctcaaaactgattgaccaagaggtagttcgacccctgattaacactaat
aaccccactactttggtgacgtgcacagattcaattagtcctaacaatggactgttcaac
acaccacctcccactccaccagaactccatcaggacttcagtggtttccagttgctggtg
gacgttgcactccagcgggctgctgaactggaatctcagaaacagaatattaagatttca
tcttag
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