Scyliorhinus canicula (smaller spotted catshark): 119969617
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Entry
119969617 CDS
T11175
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00510
N-Glycan biosynthesis
scau00513
Various types of N-glycan biosynthesis
scau01100
Metabolic pathways
scau04141
Protein processing in endoplasmic reticulum
Module
scau_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
119969617 (rpn2)
00513 Various types of N-glycan biosynthesis
119969617 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119969617 (rpn2)
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
119969617
NCBI-ProteinID:
XP_038659416
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Position
7:186801507..186872551
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AA seq
642 aa
AA seq
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MGAAGTGTLFTLALLAVTQAITIKHYLSNSDIERLTQTLKQPYSNLENAYYTIVGLQKLG
SQVPDEQAACSFLKSQVDSRNVDSLFYAAEASQALSNCEITVSNETRDLLLAAVSDDTSI
TQIYHAVGALTNFGLPLVSRDVLGALAAHISKDDASLGIIHALFATSYLSQQADLRSIVE
EIEDLVARLDDLGGIYLQFEEGLETTALFVSAAYKLSDHAGMEPAIKEDQVIQLVNAVFS
KKHFTTLSEAFSIACAAAALSHNQYHIPIIVVAEGIASVSHKKPSLKLRVTNVLSQSLTS
ADVQLEYAKSALTKSTVLQQSSFALKGDTFELNFMEVKPPSGYYDFSINVEGDNRFIGNH
VELKVKVATEVDITNVDLSVVDRDQSIAPKITRVVYPSKSKVVIAADSHQSFALSFQLAD
VNTGAELTPHQTFVRLYNQKTDQEVVFVAEPDSKKVYKFDLDVTERKSEFNSVSGTYFLF
LIIGDATLENPILWHLADVVIKFLDEETPTPVQSQNLFAPKPEIQHLFREPEKKPPIAVS
NTFTALVLAPLLLLVILWIKLGVNISNFTFSPSTIIFHLGHAGMLGIMYVYWTQLNMFQT
LQYLAILGSITFFAGNRMLAQKAVKRIAAEQSSRLAKYRTLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgcaggtacagggactctgttcaccttggccttgctggccgttactcaggcc
atcaccattaagcactatttgtcaaattctgatattgaaagattaacacaaactttaaag
cagccgtattctaatttggagaatgcctattacaccatagtaggcttgcaaaagcttggg
agtcaagtaccagatgagcaggccgcgtgtagttttttgaaatcgcaagtggactccaga
aatgtcgattcccttttttacgctgctgaagcaagtcaagccctctctaattgtgagatt
acagtcagcaatgaaactcgagatcttttgttggcagcagtgagcgatgatacttcaatc
acccagatttatcatgcagtcggagcgttgaccaattttggccttcctctggtatctcgg
gatgttcttggagcccttgctgctcacatctctaaagatgatgcctccttgggaattatc
catgcattgtttgcaacttcctacctatctcagcaggctgatctaagaagtatcgtggag
gagattgaggatctggttgcacgtcttgatgacctgggaggtatttatcttcagtttgaa
gaaggattagaaacaacagctttatttgtgagtgctgcttataagctgtctgaccatgct
ggaatggagccagcaatcaaagaggaccaagtcattcagcttgttaatgctgtattcagc
aagaagcattttaccacactgtccgaggctttcagcattgcctgtgctgccgcggctttg
tcccataatcagtatcacattccaattattgtggtagctgaaggaattgcctctgtttcc
cacaagaagcccagcctaaagttgcgtgtgaccaatgttttgtcccagagtctgacttca
gctgatgttcagcttgaatatgccaagtctgctttgacaaaaagcacagttcttcagcaa
tcatcttttgctttgaaaggtgatacttttgaattaaattttatggaggtaaagccacca
agtggatattacgacttctctatcaatgtggagggtgataaccgatttataggaaaccat
gtggagctgaaagtcaaggttgccactgaagtcgatatcactaatgttgacctttcagtc
gttgacagggatcagagcatcgcaccaaagatcactagggtggtttatccatcaaagtcc
aaagtggttattgctgctgacagtcaccagagcttcgctttatctttccagttggctgat
gtgaacactggagccgagcttactccacaccaaacttttgtccgtctctacaatcagaag
actgatcaggaagtggtatttgtggctgaaccagacagcaaaaaagtgtacaaatttgac
ctggatgtgacggaaagaaaatctgagttcaattcagtctctggaacctatttcctcttc
ttgataattggagatgcaacacttgaaaacccaattttgtggcacctggctgatgttgta
attaagtttcttgatgaagagactccaaccccagtacagtctcagaatctctttgccccc
aagcctgaaattcagcacctctttcgggaacctgaaaagaagccgcccattgcagtctcc
aatacttttaccgcccttgttctagcacccctcttgctgcttgtcattctgtggatcaaa
cttggtgtcaacatttccaatttcactttctctccgagcaccatcatcttccatttgggc
catgctggtatgttgggaatcatgtatgtatactggactcagctgaacatgtttcagact
ctgcagtatcttgctatacttggcagcatcacattctttgctgggaacagaatgttagct
cagaaggcagtaaagaggattgcggcagaacaaagcagtagattggcaaaatataggact
cttcggtag
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