Scyliorhinus canicula (smaller spotted catshark): 119969766
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Entry
119969766 CDS
T11175
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04110
Cell cycle
scau04218
Cellular senescence
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119969766 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119969766 (rbl1)
04218 Cellular senescence
119969766 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119969766 (rbl1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
119969766 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
119969766
NCBI-ProteinID:
XP_038659763
LinkDB
All DBs
Position
7:209500613..209586048
Genome browser
AA seq
1102 aa
AA seq
DB search
MPSGDGEAGHRQRLRENFDKLCQDLNMDLESGAEAWSSLQRIRLNYTLEGETLHWLACAL
YVACRKSVTPTVGKGMMEGNGVSLTRILRSSKLSLIQFFSKMKKWADMANLSQEFRERVE
QLERNFEVSTVIFKKFEPIFLDMFQNRHEDQPRLQRSRKQRRLPCSATDAFNFCWTLFVY
TKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCPNRKDLLNPGFEGLSPEFSSQDYKPPV
QPPCIIDKLCDLHDGLTVEAKGIKEHYWKPYIKRLFEKKILKGNSELFIGLLDVNNFTDN
NKAINKEYEEYVLTVGDFDERIFLGEDADEEIGTPRKSTTGVPVGKLSARMQVECNLQQH
FEKTKSLAPSTPLTGRRYLKEKESVVTPVSSATQSVSRLQSMVMGLKSIPSENLLQIFNS
CSHNPVEAITARMKEMGETFCQCYTQPMENQAGPHIDFAIKRLWLAEILYWKILETVMVQ
ESRRNRGKDMTVLLEQDIFHRSLMACCLEIVLSSYSSQRTFPWVIDILNLSPFYFYKVIE
VLIRAEEGLSRDMVKHLNNIEEQILESRAWSHDSALWKALLGADSKVPTCEEVTFPSNFE
TGNGGPIYLPMMPMSPIIHPRVKEVRTDIAGTFNKRDIPPPASPLSVHERFTSPSAGSAK
RRLFGDDNSMDTLVNKINVTQSTGLRIIQTQSIANENITLSPGQTVVPMATATVTATNGQ
TLTIPVQVYFSGIANETGGITFIPVQVNVSQQAEVVEETVQVPLSAQTLLNSSPKRIGIG
AVQEPPAAAINKPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSAELRRKIWTCFEYSLV
HCTDLMADRHLDQLLLCAVYIMAKVTKEDRSFTDIMKCYRSQPQANSHVYRSVLLKRGRC
LRMIGIDEHTEEDVDMEEQVPSFDDSKPKNNNALGPDETSNLPVSPARLSKTYPTAVEEE
RGDLIKFYNSIYVNRIKEFALKYSNVKLECGVEAPPLSPFPNVIPHPVSPRRISQRHAVY
ISPHKNGTSLTPRTAMMYRFNRSPSKNLRDINCMIKQGERLSRKRAFTMESDSDSPAKCL
CQDNDDILLKRLQDVVSERANH
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcggggacggcgaggccggccacaggcagcggctccgggagaacttcgacaaa
ctgtgtcaggacctgaacatggacctggagagcggcgccgaggcttggagcagcctgcag
agaatccgcctcaactacaccctggagggagaaactctgcactggcttgcttgtgcctta
tatgtagcctgtcggaagagcgtcacaccaacagtcggcaagggaatgatggaaggaaat
ggtgtttcactgacaagaatcctccgctcatcaaagttaagtttaattcagttcttcagc
aagatgaagaaatgggcagacatggccaacttgtcccaagaattcagagagcgagtggag
cagctggaaaggaattttgaagtctcaactgtaattttcaaaaaatttgaacctatattt
ttggacatgtttcaaaaccgtcatgaggatcaacctcgtcttcagagaagcagaaaacag
cggcgccttccatgcagtgcaactgatgcttttaatttttgctggaccctgtttgtatat
acgaaaggcaatttccgtatgattggagatgaccttgtaaattcttaccaccttttgctc
tgttgtctggacctcgtgtttggaaatgctttactgtgtccaaatagaaaagacctgctt
aacccgggttttgaaggtttgtcaccagagtttagcagtcaggactataagcccccagtg
caacctccatgtatcattgacaaactatgtgacttgcatgatggactcacagttgaagca
aaaggcatcaaggagcactactggaaaccttacattaagaggctgtttgagaaaaagatt
ctgaaaggaaacagtgagctcttcataggacttctggatgtcaacaactttacagacaac
aacaaagcaataaacaaggaatatgaagagtatgttctgacagtgggggattttgacgag
cggatatttctgggagaagatgccgacgaggaaatagggacacctcgaaaatctacaaca
ggcgttccagttggcaaactatcagcaagaatgcaagtagagtgcaacctgcaacagcac
tttgaaaaaacaaagtctttagcaccttcaacaccattgacaggaagacggtatctgaaa
gagaaggaatctgttgtaacaccggtatcctcagccacccagagcgtgagccgtttacaa
tccatggtaatgggactgaagagcatacccagcgagaatctgttgcagattttcaactcc
tgttcgcacaacccagttgaagctataacagcacggatgaaagagatgggcgagactttc
tgccagtgttacacccaacctatggaaaaccaagccggtcctcacattgattttgccatc
aaacggttatggctcgccgaaatcctgtactggaaaatcctggagacagtgatggtgcag
gaaagtcgtcgaaaccgtgggaaagacatgactgtgttactggagcaagatatattccat
cgctctctgatggcttgctgcctggagatcgttttgtcctcctatagttcccagcgtacc
ttcccatgggttattgacatcctgaatcttagccccttttacttctacaaggtgatcgaa
gtgttgattcgtgcagaggagggtctttcccgtgatatggtgaagcacctcaacaatatt
gaagagcagattttggagagtcgagcttggagccatgactcggctctttggaaagctttg
cttggagcagacagtaaggttccaacatgtgaagaggtgacctttccttccaattttgaa
actggtaatggaggtcccatctacctgccaatgatgccaatgtctcctataatacacccg
cgagtaaaggaagtccggacagacattgctgggaccttcaacaaacgtgatattcctcct
cccgcatcaccgttgtctgtccacgaacggttcacttctccctctgcgggaagtgctaaa
agaagactctttggtgatgacaattcaatggacactcttgtgaataagatcaatgtcacc
caatcaactgggctgaggattattcagacacaaagtatagccaatgaaaacattactctc
tctcctgggcagactgtagtaccaatggcaacagctactgtgacagcaaccaatggtcag
acgctaacgatacctgtgcaagtttatttttcaggtattgcaaatgagactgggggcatc
acttttattccagtccaggtgaatgtatcccagcaagcagaagttgtagaagagaccgtt
caagtcccactctctgcccagactttactcaactcttctcctaagcgaataggaattgga
gcagtgcaggaacctccagcagcagcaatcaataagccgaagaagactggctcactggca
ttattcttcagaaaggtatatcatctggccagtgtccgcctgcgggacttgtgtttaaag
ctggatgtgtctgcagagcttcgtaggaagatttggacttgttttgagtattctttggtg
cattgtacagatctgatggcagacagacaccttgatcagctcctcctttgtgctgtctac
ataatggcaaaggtcactaaggaggacaggtctttcacagatataatgaaatgttacaga
agccaaccccaagccaacagccacgtatatagaagtgttcttcttaaaagagggcgatgt
ttgaggatgattggtattgatgagcacacagaggaagatgtagacatggaagagcaggtg
cccagttttgatgattctaaaccaaaaaataacaatgcacttggtcctgacgagacaagc
aaccttccagtgtcgccagccagattgtccaaaacatatcctacagctgtggaggaagag
cggggtgacctgattaagttttataacagtatctatgtgaacaggattaaagagtttgcg
ctgaagtactccaatgtaaaactggagtgtggggtggaagcaccgccactgtctcctttt
ccaaatgttataccccatcctgtatctccacggcggatatcacagcgacatgcagtctat
atctcccctcacaagaacggcacttccctcacgccacgtacagccatgatgtacagattt
aaccggagcccatcaaagaatctcagggatatcaactgcatgatcaaacagggggagcgg
ctgagcaggaagcgagcattcaccatggaaagtgacagcgactctccagcaaaatgtctc
tgccaggataatgacgacattttgttgaagcgactgcaggatgtggtcagcgagcgggca
aaccactga
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integrated database retrieval system
