Scyliorhinus canicula (smaller spotted catshark): 119969963
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Entry
119969963 CDS
T11175
Symbol
nup155
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119969963 (nup155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119969963 (nup155)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119969963 (nup155)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CagY_I
Motif
Other DBs
NCBI-GeneID:
119969963
NCBI-ProteinID:
XP_038659858
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Position
8:complement(199400127..199679218)
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AA seq
1294 aa
AA seq
DB search
MLLDLSSFTQSCEIHCSPLFIRCFPFRGDLAYFDGLSETILSVGLVKPRTGIFQPHIRQL
LVLTTPVDIVILGVSFANSQTGLGMLNDSVSGGMQLLPDPLYSIPTDNTYLLAVTATDTG
RIFLAGKDGCLYEVAYQADAGWFSQRCRKINHSKSSLSFLVPSFLQFTFSEDDPIVQIAI
DNSRSILYTRSEKGVLQVYDLGVDGLGMCRVACLSQNSIVSAAGNIARTIDRAVFKPIVH
IAVIESSESVDCHLMAVTHAGVRLFFSAMPFKHPAVRPSLLVLVHVRLPPGFSASATPQR
PSKVHKALYTKGILLLAASENDDNDVLWCINHDSFPFQRPLMEVQMTANIDGHSWALSSI
DYSPLQKIVTPLNKERVPLTDPPVVIVQHLTPPKRFILLTAQGSHFFQKLRPVDQLRHLL
VSNAGGEGEDVERFFKLHREEQACASCLILACSMAANDREVSGWATRAFFRYGGEAQMRF
PAAIQQPMNVGPIFSTPQPGPVMPLGSPFSSPGISSIPVSGMKTVGMPTPLFSPGSPGLY
SGVSLPPITTMSGPEVVFSGKHNGICIYFTRIMGNIWDSSIAVEQTVHHSRQQAMLFESS
VDVKVLANILLELNGLREFLDRNSQFGSGALGNASFSASNVPQRLLGFMRPDGGSQQVQQ
ELQRKYHTEAQAYEKLSLQGMQQLLHCTCQTLALWKLLCDHQFSIVIADLQKELQEQLKS
TPFRDLIIRGKELCGALVTSLINRYIGDNASVDAISKHLRDTCPLLYSNDDAVCSKANEL
LQCARQIQNKAEKEKTMRESLRLYQEIGHQVDLSSVCTQFRQVRFYEAVAELSLSAADKT
DPQGLGLHYYKNGEPEEDPVGQQAFQERLNCYKCISDTLQELVNQSKAAPQSPSVPKLPG
PPVLSSDPNMLSNEEASQHFEQMLKLAQRSTDELFNIALFNWLIQADLMDKLLEVNSPFL
EPYLVRMAKQDQNKVRYMDLLWRYYEKNRNFSNAAKILSRLSDMHSTEISLQQRIEYISR
AILSAKSSTATSSQAADGEFLHELEEKMEVARIQLQIQDTLARNYSQHPSVQEAISQLDT
ELMDITKLYGEFADHFRLSECKLAIIHCAGHSDTILVQTLWQEIIEKELADSRLMNCTDR
MQTLSMKLVSLGKLYAGTPRYFPLGTYTSLNRKECQSHDRLKRSAGLETLSQRDLGVRVH
RSLKVATQLYKTLDPYWQRVKKPLHLLECIHVLLSVYVQEPNKVPAHERRRFTNNCLDAI
GRFLVELQSMNPTCTLQTTIGNFKSLQSKLDRLQ
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgctgctagacctgagcagcttcacacaatcatgtgaaatccattgttctcctctgttc
attcgctgcttccctttcaggggtgatttggcgtacttcgacggactgagcgagacaatt
ctgtcggtgggtctggtaaaacctcgaacagggatattccaacctcacatcagacagctg
cttgttctgaccactcctgtggacattgtgattctgggtgtcagcttcgccaactcccag
acagggctgggaatgctgaatgacagcgtgagtggagggatgcaactactgcctgacccc
ctctactccattcccactgacaatacctacttgctggctgtcactgccacagacactggc
cgcatattcctggctggcaaagatggctgtttgtatgaagttgcctatcaggctgatgct
ggttggtttagccaacgatgcaggaaaataaatcactccaagagctctctttcctttctt
gtcccctcgtttcttcaattcaccttctctgaagacgatcctatagttcagatcgccatc
gataactcccggagcatattatacacacgctcggaaaagggagtcctgcaggtgtatgac
cttggtgttgatggcctagggatgtgcagagtggcttgcttatcgcagaattcaatagtt
tctgcagcaggtaacatagccaggaccatagaccgtgctgtcttcaaaccgattgtccac
attgcagtgattgagagctcggagtctgtggattgccatctgatggctgttacacatgca
ggtgtccggctttttttcagcgccatgcccttcaagcacccggctgtccggcccagtctg
ctggtacttgtacatgtccgtctcccaccaggattctctgcctcagcgactccacagaga
ccttccaaggttcacaaagctctttatactaaaggtattctactgttggctgcctccgag
aatgatgataatgatgtcctctggtgtattaaccacgactccttcccattccagcgaccc
ctcatggaagtacagatgacggcaaacattgatggccattcgtgggccctgtcctccatc
gattattccccgcttcaaaagattgttactccactcaacaaggagcgcgtccccctcaca
gacccgccagttgtgatagtccagcatttgacgccacccaaaagattcatcctgctgacg
gcacagggcagccattttttccaaaagcttcgtccggtggaccaacttcgtcatctcctt
gtgagcaatgcaggtggtgagggcgaggacgtcgagcgattcttcaaactacatcgggag
gaacaggcgtgtgcttcgtgtctcattcttgcctgttcaatggcagccaatgatcgggag
gtgtcaggctgggcaacccgtgccttcttcaggtatggtggagaagcacagatgcggttt
cctgcagccattcagcagccaatgaatgtggggcccatcttcagcaccccacaaccagga
cccgtgatgcctctgggtagccctttctccagtcctggtatctcttctattccagtctca
ggtatgaagactgtggggatgccaacgccactgttctcccctggaagccctggactgtac
agtggtgtctctctccccccaatcaccacaatgtcgggaccagaagtggtattttctgga
aagcataatggcatctgcatctatttcaccaggatcatggggaatatctgggacagtagt
atagcagtggaacagacagtccatcattccaggcaacaggcaatgctgtttgagagcagt
gtcgatgtgaaggttctggccaacattctgcttgaactcaatggattgcgggaattcctt
gatagaaactcccaatttggatctggagctctaggaaatgccagttttagtgcttccaat
gttccgcagaggctgctggggttcatgcgtcctgatggaggctcacagcaagttcaacag
gagctgcaacggaaataccacacggaagcacaggcctatgagaagctgtctctgcagggt
atgcagcagctgctacattgcacatgtcagaccttggctctgtggaagctgctctgtgat
caccagttcagcatcgtcatcgcagatttacagaaggagctccaggaacagttaaaatcc
acaccgttccgagacttgattatccgagggaaggagttgtgtggtgcactcgttacctcg
cttattaaccgatacattggagacaacgcctcggtcgatgccatcagtaaacatctgaga
gacacgtgtccccttctgtacagcaatgacgacgcagtgtgctccaaggcgaatgagctg
ctacagtgtgcaaggcagattcagaacaaggccgagaaggagaagactatgcgagaatct
ctgcgtctgtaccaggagattgggcaccaggtcgacctttccagtgtctgcacacagttc
agacaagtgcgtttttatgaggctgtggctgagttgagcctcagtgctgctgataagacg
gatccacagggcttgggcctacattattacaagaacggtgagccagaggaggaccctgtg
ggacaacaggccttccaggagaggctgaattgttacaagtgcatctcggacacactgcag
gaactggtaaaccaaagtaaggccgctccacaatctcccagcgtccccaagcttccgggg
cctccagttctgtcatctgaccccaatatgttgagcaatgaggaggcatcgcaacatttt
gaacaaatgttgaaacttgctcagaggtcaacggatgaactcttcaacatcgctttgttt
aactggctgatccaggctgacttgatggacaagctgctcgaggtaaattctccatttctg
gagccatatttggtccggatggcaaaacaggatcagaacaaagttcgctacatggacttg
ctttggagatactacgagaaaaaccggaattttagcaatgcagcaaaaatcctgtctcga
ctttcagacatgcacagcaccgagatctcactgcagcaaaggatcgagtacatttctcga
gctatcctcagtgcaaagagctccacagcaacatcatcgcaggctgctgacggtgaattt
ctacatgaactcgaggagaaaatggaggtggccaggatacagctccaaatccaggacacg
ttggcacgcaattactcgcagcatccgtctgtgcaggaagctatttcccaactcgacacg
gagctcatggatatcaccaagttgtacggggagtttgctgaccatttccgtctctccgag
tgtaagctggctataatccactgtgcaggtcactccgataccatccttgtgcaaaccctt
tggcaagaaatcattgagaaagaattggctgacagcaggttgatgaattgcacggatcgg
atgcagacgttgagtatgaagcttgtgtccctgggaaaactttacgctgggactccacgt
tattttccacttggtacgtacacgtcattgaatcggaaagaatgtcagtcacacgacaga
ttgaaacgctcggctggattggagacgctctctcagagggatctcggtgtccgtgtacat
agatcccttaaagttgccacccagttgtacaaaactctagatccttattggcagagggtg
aagaagcctctccacttgctggagtgtattcatgtccttctgagtgtctacgtgcaagaa
cccaataaagtcccagcccatgagagacggcgattcaccaacaactgcctggatgcaatt
ggccgattccttgttgaacttcagtcgatgaacccgacctgcactttacagacaacgatt
ggaaatttcaaatcactgcagtcgaaactggaccgtctgcagtga
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