Scyliorhinus canicula (smaller spotted catshark): 119970095
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Entry
119970095 CDS
T11175
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119970095 (elp1)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
119970095 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
119970095
NCBI-ProteinID:
XP_038660039
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Position
8:7987453..8075160
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AA seq
1334 aa
AA seq
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MRNLKLLHSLHCSGWKGLGKPQCLTLRTDTGTLLVGSDLGVTELDPHTEQVLRKVSLVEE
AFLPEDGTGCIVGIEDLPDQESVCVATASGDVILYNLNSNQLECVGSVDSGLSGMSWSPD
QELVVLTTGQGTIIMMTKDFDAVTEVGIHQDDFGEGKFITVGWGKKETQFHGAEGKQAAR
CKPVEIQPAFPWDDQKPRVTWRGDGQLFAVSTICPVAGSRKLRIWNRECVLQSTSESVSG
LEQALCWKPSGNLIASTQRKLNKHNVVFFEQNGLQHGEFSLPFDKGQVKVNEMVWNSDST
VLAVWLEDLRSTNGGIKDVHQNTYVQLWTVGNYHWYLKQSLHFGGDRAERIVSLMWDPES
PYRLHVLCSGWLYLSFNWHWTIDRSTGEESGDFANVAVIDGDKVLVTPFRQTVVPPPMCA
YQLQLPCAVNQIVFSSDPQRSNDIAILTTDSRISVYQAGDGVNEDTQIKVGAGGGSGSKK
RITIPKLVKTYRIKFEEGASEPLNPLKLRMITWVKESMFLALCQGHRTSQSVVCQLVTSS
EESQEGEIQIRSPVIVDGHVINLCHNQKTHTVALLLSSGQILRYFWATDSSESCVKPWKS
ATGCLVQFPQPCIETALCTVDAEQMVLGLTERSRFFINDLEIASNVTSFVVCDEFLLFTT
HSHTCRCLDLRTTSLKALSHLSSSDSQPNDETVRRVERGSRIVTVVPQDTKLLLQMPRGN
LEVVHHHALVLAQVRKYLDRLKYKEAFECMRKLRINLNLIHDHNPKVFLENLENFVKQIE
SINYINLFLTELKEEDVTKTMYPYLPSSSTSVHEVGTKVNTICDALRTTMERINPHKYSL
SILTCHVRKRTPELETALQKVHELRVDPPSDPEAVSAEEALKYLLFLVDVNELYDYAVGT
YDFDLVMMVAEKSQKDPKEYLPFLNNLKKMETNYQRYTIDKYLKRYKKALGHLSKCGPQH
FTELLNLVKDQQMYNDALKLFPVNSLEYKDISIAYGEYLSEKHYYEQAGLIFARCGECER
ALGAFLLCNSWQQAFCMVSRLHFTEDKVVGMAQTIAGRLTEQQRHSEAAIVLEQYAKDYE
EAITSLLQGAAWEESLRLIYKYNRADILETNLKPSILEAHRNHMEFLDTQKTLFMRHKSR
LAVVREIKEKEQDGFLDEEVADGPDSDLYSEASSMRSASGMGSKYSHSNSRISARSSKNR
RKAERKRHSLKEGSPLEDVALLEALGGIIYTVDKLTGEVHRLLKVLVLFGYDVLASELQR
SLEDALRVVEKSIPDIWQPDRKKAAACPVLGPDSTANSITASFGHPRNGAVPHQDEIFDP
PKLNKNVQWKLNIL
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacctgaaattgctgcacagcctgcactgcagcgggtggaagggtctgggcaaa
cctcagtgcctgactctgcgtacggatactgggacgctgcttgtgggatcagacctagga
gtcacagaacttgacccgcacactgagcaggtactcagaaaggtgtccctggtggaagaa
gcatttctccctgaagatggcactggctgtatagttggcattgaggatctgccagatcag
gaatctgtttgtgtcgctactgcatctggcgatgttatactttataatctaaactcaaat
cagctggaatgtgtcggcagtgtcgacagtggactgtccggaatgagctggagtccagac
caagaacttgttgtgctcaccacagggcaggggaccatcataatgatgaccaaagacttt
gatgcagttacagaagtcggaatccaccaggatgactttggcgaaggaaaattcatcact
gtcggttggggtaagaaggagacgcagttccatggagcagagggtaaacaagcagctcgt
tgtaagccagtagaaatccagccagcatttccttgggatgatcagaagccacgagtgacc
tggcgaggggatgggcaactgtttgctgtcagtaccatttgtcctgtggccggatccaga
aagctgagaatatggaatagagaatgcgtgctccagtcaactagtgagtctgttagtgga
ctcgaacaggccctgtgctggaaaccatcagggaacctgattgcatccacacagcgaaag
cttaacaagcacaacgttgtcttcttcgaacagaatggtttacagcacggagagttttcg
cttccttttgacaaaggccaagttaaggtcaatgagatggtctggaacagtgactctact
gtgttggcagtctggctggaggatttgagatcaacgaacggagggatcaaagacgtccat
caaaatacatacgttcagttgtggacagtgggcaactaccactggtacctgaaacagagc
ctgcattttggtggtgaccgggcggaacggattgtatccctaatgtgggatcccgagagt
ccctatcgactgcacgtgctctgcagtgggtggctttacctgtcctttaactggcattgg
accattgatcgaagtacaggagaagagagcggtgactttgctaacgtagctgtgatcgat
ggagataaagtactggtgacaccttttcgccaaacagtggtgcctccgccaatgtgtgca
tatcagctgcagctgccctgtgctgtgaatcagattgtattctcgtcagatccacagagg
agcaatgatattgcaatcctgacaacagacagccggatttcagtctaccaggctggtgat
ggtgtgaatgaggacactcaaattaaagttggtgctggcggtggaagtggatcgaagaaa
cgcatcacaatccccaaactggtaaaaacatacagaattaagtttgaagaaggagctagt
gagcccctgaacccattgaagttgcgaatgattacctgggtaaaggagagcatgtttctg
gctctgtgtcaaggtcacaggacttcgcagtctgttgtctgtcagctggtaacttcatca
gaggagtctcaggagggagagattcagatcaggtctcctgtaatcgtggatggccacgta
atcaacctgtgccacaaccagaagacccatactgttgctttgctgctttccagtgggcag
attctaagatacttctgggctacagattcctctgagtcatgtgtgaaaccctggaagtca
gctactggatgtttggtgcaatttcctcagccttgtattgagacagctctatgtactgtc
gatgcagagcaaatggtcttgggtctgacagaaagatctcgttttttcatcaacgattta
gagatagcctccaacgtcacgtcatttgtcgtgtgcgatgagttcctgctgttcacgacc
cattcacacacctgtcgctgtctcgatcttaggactacttcattaaaagctttgtcgcac
ctttcaagtagtgattcccagccaaacgatgaaacagtccgtagagtggagagaggttct
cgcattgtgactgttgtcccccaggacaccaaactcctccttcagatgccgcgtgggaac
ctggaagtcgtacaccaccatgcattggtactggcacaggtgcgaaaatatctggacagg
cttaagtacaaggaagcctttgaatgtatgaggaagctgagaataaatctcaatctcatc
catgatcacaacccgaaggtatttttggaaaatttggagaactttgtgaaacagatcgag
tccataaattacatcaatttgttcctgactgaattgaaagaggaagatgtcacaaagaca
atgtacccatacctccccagctcatcaacttcagtacatgaggttgggactaaagtgaac
acaatctgtgacgcactccgaactacaatggagagaatcaatcctcacaaatacagtttg
tcaatactgacctgtcacgtgcgaaaacgtactccagaactggaaactgctcttcagaaa
gtccatgaactgagagtggatcctccgtcagaccccgaggcagtcagtgccgaagaggca
ctgaaatatctcctcttcctggtagatgtgaacgaactatacgactatgcggtgggcacg
tatgactttgacctcgtgatgatggtggcagagaaatcgcaaaaggatcctaaggaatat
ctaccgtttttgaacaatctgaagaaaatggagaccaactaccagcgatacaccatagat
aaatatttgaaacgatacaaaaaagctctcggccacctcagtaaatgtggtcctcagcat
ttcactgagcttcttaacttggtaaaagaccaacagatgtacaatgacgccttgaagtta
ttcccagtaaacagcctggaatacaaggacattagtattgcttacggcgagtatctcagc
gagaagcattactacgagcaggcggggctgatctttgcacgatgcggggagtgtgaaagg
gcactgggagccttcctgctatgcaacagttggcagcaggctttctgcatggtgtctcgg
ctccatttcactgaggacaaagtagttggcatggcacagaccatcgcagggagattgacg
gagcagcagagacattccgaagcagccatagtcctcgagcaatatgctaaggactatgaa
gaagccattacgtcacttctccaaggtgcagcctgggaagaatcactgcgactgatctac
aagtacaacagggcagatatcctggaaactaacctgaaaccttccatattggaagctcat
agaaaccacatggaattcctagacacccagaaaaccttatttatgcgtcataaatctcgg
ctggcggttgttcgtgaaattaaagagaaagaacaggatggatttttagatgaggaggtg
gctgacgggccagactcggatctatattcagaagctagcagtatgcggtcagccagcgga
atgggctccaaatattcgcacagtaactccaggatctcagcgcgaagttcaaagaaccgt
cgtaaagcggagcggaagaggcacagcttgaaggagggaagtccgttggaggacgtggca
ttgttggaagcgctgggaggaattatatacaccgtggacaaattaaccggtgaagtgcac
agattgctgaaagttctggtcctttttggatacgacgttctggcttcggagctgcagcgg
tctctggaggatgccctgcgagtggtggagaaatccatccctgatatctggcagcctgat
cggaagaaggcagctgcctgcccagtacttggtcctgattcgactgcaaatagcatcact
gcgtccttcgggcacccgaggaatggggcggtacctcatcaagatgaaatttttgaccct
cctaaactcaataagaatgtacagtggaagctaaatattctatga
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