Scyliorhinus canicula (smaller spotted catshark): 119970118
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Entry
119970118 CDS
T11175
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like isoform X1
KO
K28108
shortage in chiasmata 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119970118
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119970118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
Death_3
SAM_6
DUF7867
Motif
Other DBs
NCBI-GeneID:
119970118
NCBI-ProteinID:
XP_038660078
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Position
8:complement(9829872..9950796)
Genome browser
AA seq
972 aa
AA seq
DB search
MYTAVKYQSIDYLHEALTRQKLTVNWLLLPTPQHLDHTDKYCYQGRLDNDIYRRPWTRGT
VLSMSKQMSPDSISTEWKKHVCTENFLERVGLHSVASQIVSDSLEIVPSSNPNSQTDTED
IFSLSRRDVQLANGGQEKFEVTDPTDVKSQTETDFFLHDEMVFGDYLSKFQKQLPRLHDL
CSRLKIYSLKDPFVNSEGEPLTEEMLFRSCMLYPSDEIFTGKTNEILDVEEDFKQFSQLD
NESLMLPVELNIGNMVDLSWIECTSPLSEIKDLLPLTTEDVTSIDSPKAIENNDSKVKLM
LELEIFESCRTMNYLLNENNEEVNESTIEAREPVCREFLKILEIETPLTPPHSTNSMEIS
LSTKELQKEELSPFKLDTILSGKTKDFLEFQIWQSENFYRSFSSLRLGEPQIQEDALHHE
SVSELIKLLKASPEELMRSPVKGLWGDYMKATAVQTDMVEQLDAGHDEVEELTAKLEEFL
PVTIVQLEKCSDNVALIYENSNTSIKPYPEEKETTYSYAHQEISTEYKTLPLQSQLPTTS
HKSCIDSEDSCNTRMKVYQEDCDPLSNFIMLRSKQISTPCQTKSDNENQMPDQVPVDKST
NNSSVSSKSETPNKDFAQGTNQQDLKNALIEVQASDSQCQAYCLLEATATPVLKHMKGFA
IHTAATGTFTTLAFDHTRFFLKHQEKVVSDAAKKGKHDENEVQMYKNAAILHLLVTIRDL
LLMCDLETAIAYLFKAKEMYVSTLGSSLDDIWKKLQIVQYVSQSNQESNPKVGELENQIL
VWIQTAHTKDIKILIIIRMDSDCIRATLTNTLTKVKDLNPAAVYPEENTTLSRQEVLNCL
ERHSCLVVYSHHIGADFPWVEFSLVVEYDYMENSPWAELCKQQDINHMIFKTILPKGSEE
GDMLAIKSEFLLNELQIPYTFLISEGLLNIPTMLQILESRYNMTLWRERLMRGYTLGEQI
TMPLLRWMNALL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgctgttaagtatcagagcatagactatcttcatgaggctttgaccagacag
aagcttacagtaaactggttactacttccaacacctcagcatctagatcatactgacaag
tattgttaccaaggtcgactcgataatgatatttacaggaggccgtggactcgagggaca
gtgctttctatgtccaaacagatgagtcctgactctatatcgactgaatggaagaaacat
gtctgcacagaaaactttcttgagagagtaggtctgcattctgtcgcatcgcagattgtc
agtgacagtttagagattgtgccaagttcaaacccaaactctcagacagacacagaagat
attttctcattgtcaaggagagatgttcaacttgcaaatggcggacaggagaaatttgag
gttactgatcctacagatgtgaaatcacaaacagaaacagatttttttctgcacgatgaa
atggtatttggagattacctatcaaaatttcaaaaacagctacccaggttgcatgatctc
tgcagcagattgaaaatatattctttaaaggacccgtttgtaaattctgaaggagagcct
ttgactgaggaaatgcttttcaggtcctgcatgctctatccctcagatgagatttttact
ggaaaaacaaatgaaatccttgatgttgaggaagatttcaaacaattttcacagctggac
aatgagtcattgatgctgcctgttgaactgaatatcggcaatatggtggatttaagttgg
attgaatgcacatcaccactatcagaaattaaagatcttttaccactgacaacagaagat
gtaacaagcattgattcacctaaagccattgaaaataatgattctaaagtgaaacttatg
ctggaattagaaatatttgaatcctgcagaacgatgaattatttgttaaatgaaaataat
gaagaggttaatgaatcgacaatagaagccagagaaccagtttgtcgggaatttttaaaa
atcctggaaatagaaactccactgacacctccacattcaacaaattctatggaaatctct
ctatcaaccaaggaactccaaaaggaggaactttctccatttaagttagatacaatttta
tctgggaaaaccaaggattttctggaatttcagatatggcagtcagaaaatttctaccga
tcgttttcatctctgaggttgggagaacctcagatacaggaagatgctctccaccatgaa
tcagtctctgagctgattaagctgttaaaggcctctccagaggagctgatgagatcccca
gtaaaaggtttatggggagactatatgaaagcaactgcagttcagacagacatggtggag
caactggacgcaggccatgatgaagtagaagagctgactgcaaaacttgaagaattttta
ccagtcaccatagttcagttagagaaatgttcggataatgtagcattaatttatgagaat
agtaacacttccattaaaccatacccggaagaaaaagagacaacatattcctatgcacac
caagaaataagtacagaatataaaacattaccattacagtcacaactaccaaccacttcc
cataagagctgcattgattctgaagatagctgcaacaccagaatgaaagtatatcaggaa
gactgtgatcctctcagcaatttcataatgctacgatccaagcagatttcaactccttgt
cagacaaaaagtgacaatgaaaatcagatgcctgatcaggttcctgtagacaaaagcact
aacaacagttcagtgagcagtaaatcagagacgccgaataaagattttgcacagggaact
aatcaacaagatctaaagaatgccttgatagaagttcaggcatcagacagccagtgtcaa
gcatactgtttgttggaggccacagcaacacctgttctcaaacatatgaagggctttgca
attcatacggctgcaacagggacgtttactacacttgcttttgaccacactaggtttttc
ttaaagcatcaggagaaggtagtgagcgatgctgctaaaaaaggcaagcatgatgaaaat
gaggttcaaatgtacaagaatgctgcaatacttcatctattggtgaccatccgtgacctt
cttttgatgtgtgatcttgaaactgctatagcatatttattcaaagctaaagaaatgtat
gtaagcacattgggttcaagtttggatgacatttggaagaaactccaaattgttcaatat
gtcagtcagagtaatcaagaaagcaacccaaaagtgggtgaacttgagaatcaaatttta
gtatggatacaaaccgctcacacgaaagatattaagatattgatcatcatcaggatggat
tcagactgcattagagctacactcacaaacaccctcaccaaagtgaaagacttaaatcca
gctgcagtttatcctgaagaaaataccactttgagtcggcaggaggttttaaactgtctg
gaaagacattcctgtttggttgtttacagccatcacatcggagcagattttccttgggtt
gaattctctttggtggtagaatacgattacatggagaattcaccctgggctgaactttgc
aagcagcaagatataaatcatatgatctttaaaacgatacttcctaagggttcagaagaa
ggagacatgctagcaattaagtctgagtttctgttgaacgagttgcagattccatacact
ttcttgatatctgaaggcttgttgaatattccaaccatgctccaaattctagaatcaagg
tacaatatgactctttggagagaacgactgatgagaggctacactttgggggagcagatc
actatgccattattacggtggatgaatgcactgctataa
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