Scyliorhinus canicula (smaller spotted catshark): 119970121
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Entry
119970121 CDS
T11175
Symbol
susd1
Name
(RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1
KO
K23819
sushi domain-containing protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119970121 (susd1)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Other domain-containing proteins
Sushi domain-containing proteins
119970121 (susd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sushi
Fn3_PTPRU
EGF_CA
EGF_3
cEGF
PTP_tm
Motif
Other DBs
NCBI-GeneID:
119970121
NCBI-ProteinID:
XP_038660092
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All DBs
Position
8:complement(10133967..10238217)
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AA seq
1229 aa
AA seq
DB search
MRTKLPSAWSFTALVLSLYLGVFNTDFLYLHAAADPTANLDVCSTCHVNASCTITSGNKA
CTCNYGFYGNGITFCADKDECNMGAKRICGDFTTCYNTFGGYYCTCNEGYRPSNNKEYME
SFTPNDGTQCAIVDCGSPPALLNMASHPPVNTTYGRAVVYHCQVGYVRVRGNGTSICSAQ
GQWEGANLECEAVDCKSPPVLLNTVSYRAVNTTYGSTVVYYCQVGYVRVRGNNTSICSAL
GQWEGANLECDVVDCRSPPALLDTVPYPPVNRTYGSAVVYHCQVGYVRVRGNDTSICSAQ
GQWEGANLECTAIDCGSPPALLNTVSHPPVNTTYGSAVVYHCQVGYEGVRGNDTSICSAQ
GQWEGANLECEAVECGSPPALQDTVQYPPRSTTYGGTAAYQCQVGYFHPRGNATLTCSAQ
GRWEGANLECKVVDCKSPPALLNTLSYPLVTTIYGSAVVYHCQVGYVRVRGNDTSICSAQ
GQWEGANLECEAIACLSPPALPNTVSQPPVNTTYGSAVVYHCQVGYVIVRGNYTSICSAQ
GQWEGANLECEAVDCGSPPALLNTVLHSPVNTTYGRAVVYHCQVGYEGVRGNDTSICSAQ
GQWEGANLECEAVDCGSPPALLNTVLHSPVNTTYGRAVVYHCQVGYEGVRGNDTSICSAQ
GQWEGANLECEAVDCGSPPALLNTVLHSPVNTTYGRAVVYHCQVGYEGVRGNDTSICSAQ
GQWEGANLECEAVDCGSPPALLNTVLHSPVNTTYGSAVVYHCQVGYEGVRGNDTSICSAQ
GQWEGANLECEAVDCGSPPALLNTASQPPVNTTYGSAVMYHCQVGYMRVRGNGTSICSAQ
GQWEGANLECEAVDCESPPALLNTVSYHSVNTTYGSVVVYHCQVGYVLVRGNNTSICSAQ
GQWEGANLECEEIDCGIPPAIPRTELLQYNCTRRESVVHYRCRDGFYTVSGRSMSVCTEA
GRWEEVTLLCKVNDFILFNESCLKWRRDRFGSRSEDTYSFQIQGQRSYQSEFIFETSFNY
STADDAPVVCLNLQPGTNYTVNITALTLQHSAHLQLSTAVTDPPVPAVQVMVVEQTLPPL
ILRRVENKNGPISFYQVVVLPLPLQHSFDCSSQTMRSYFGHRRGSEAYITAEFLALDVED
GMRFSVGDRLYYREYYNAALESGKNYSFLLKTISEWNSVKKQSCVTLAQLKGSSGSVKIM
LFLGLASLGTVGFLLFLCYSLVWSCTIRR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgaaacttccctcagcttggagcttcacagcccttgtcctgagtctgtacctg
ggggtcttcaacactgactttctctatctgcatgcagcagctgatccaactgcaaatctg
gatgtttgctccacctgtcacgtgaatgcttcgtgcaccattaccagtggaaacaaagcc
tgcacctgtaactatggattctatggaaatggaattacgttctgcgcagataaagatgaa
tgcaacatgggagctaaaaggatctgtggtgactttaccacttgttacaacacgtttggt
ggttattactgtacgtgcaatgaaggatacagaccatcgaacaataaggagtatatggag
tcattcactcccaatgatggaactcagtgtgcaattgttgactgtggatcaccaccagcg
ttactgaacatggcgtcacatccaccagttaacacaacctatgggagagctgttgtgtac
cactgccaggttggctacgtgcgtgtgagaggaaacggcacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgactgtaaatcaccaccagtg
ttactgaacacagtgtcatatcgagcagttaatacgacctatgggagtacggttgtatat
tactgccaggttggctatgtgcgtgtgagaggaaacaacacatcgatctgttcggccctg
ggccagtgggaaggagcaaacctggaatgtgacgttgtcgactgtagatcaccaccagct
ttactggacacggtgccatatccaccggttaacagaacctatgggagtgctgttgtgtac
cactgccaggttggctatgtgcgtgtgcgaggaaacgacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtacggccattgactgtggatcaccaccagct
ttactgaatacggtgtcacatccaccggttaacacaacctatgggagcgcggttgtgtac
cactgccaggttggctatgagggtgtgagaggaaacgacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgagtgtggatcccctccagcc
ttacaggacacagtgcaatatccaccaaggagcacaacatatggaggtacggccgcatac
cagtgccaggttggctattttcatccgagagggaatgccacattaacctgctctgcccag
gggcgatgggaaggagcaaatctggaatgcaaagttgttgactgtaaatcaccaccagct
ttactgaacacattgtcgtatccattagttaccacaatctatgggagtgcggttgtgtac
cactgccaggttggctacgtgcgtgtgagaggaaacgacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctattgcctgtctatcaccaccagcg
ttaccgaacacagtgtcacagccaccagttaacacaacctatgggagcgcggttgtgtac
cactgccaggttggctacgtgattgtgagaggaaactacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgactgtggatcaccaccagcg
ttactgaacacggtgttacattcaccggttaacacaacctatgggagagctgtcgtgtac
cactgccaggttggctatgagggtgtgagaggaaacgacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgactgtggatcaccaccagcg
ttactgaacacggtgttacattcaccggttaacacaacctatgggagagctgttgtgtac
cactgccaggttggctatgagggtgtgagaggaaacgacacatcgatctgttctgcccag
ggccagtgggagggagcaaacctggaatgtgaagctgttgactgtggatcaccaccagcg
ttactgaacacggtgttacattcaccggttaacacaacctatgggagagctgttgtgtac
cattgccaggttggctatgagggtgtgagaggaaacgacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgactgtggatcaccaccagcg
ttactgaacacggtgttacattcaccggttaacacaacctatgggagcgctgttgtgtac
cactgccaggttggctatgagggtgtgagaggaaacgacacatcgatctgttctgcccag
ggccagtgggagggagcaaacctggaatgtgaagctgttgactgtggatcgccaccagcg
ttactgaacacggcctcacagccaccagttaacacaacctatgggagcgcggttatgtac
cactgccaggttggctacatgcgtgtgagaggaaacggcacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagctgttgactgtgaatcaccaccagcg
ttactgaacacagtgtcatatcactccgttaacacaacctatgggagtgttgttgtgtac
cactgccaggttggctacgtgcttgtcagaggaaacaacacatcgatctgctctgcccag
ggccagtgggaaggagcaaacctggaatgtgaagagattgactgcggaatcccaccagca
ataccgcggactgagctgctccagtacaactgtacaagacgagagagtgttgtccactac
agatgcagggatggattttacactgtgtcgggaaggagtatgtctgtctgtaccgaagca
ggacgatgggaggaagtaaccttgctgtgtaaagtcaatgattttattctgtttaatgaa
tcctgcttgaagtggagaagggaccgatttggatccagatccgaggacacatattcattt
cagatacaaggacagagaagctaccaaagcgagttcattttcgagacgtcatttaattat
agtacagcagatgatgccccggttgtgtgcttgaacctgcaaccaggaactaactataca
gtgaatatcacagctcttaccttgcaacattctgctcacctacaattatcaacagcggtc
actgaccctcctgtgccagctgtgcaggttatggttgtcgagcaaacgcttccaccactc
attctccgcagagttgaaaataagaatggacccattagtttttatcaggtagttgttctg
cccttgccgttgcaacattcgttcgactgtagttcccaaaccatgagaagctactttggt
cacagaagaggcagtgaagcatacataacggcagaattcctggcattggatgttgaggat
ggaatgcggttttctgtgggagaccggctatactacagagagtattataatgctgcttta
gaaagtggcaagaattattccttcctgctgaaaaccatcagcgaatggaattccgtgaag
aaacagtcgtgtgtgactttggcgcagctgaaaggttcgtcaggcagtgtgaagattatg
ttgtttttaggtctggcttccttagggacagttggatttcttctgttcctctgttattct
ttggtatggagttgcacgataagaagatga
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