Scyliorhinus canicula (smaller spotted catshark): 119970138
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Entry
119970138 CDS
T11175
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119970138 (lingo2)
Membrane trafficking [BR:
scau04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119970138 (lingo2)
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NCBI-GeneID:
119970138
NCBI-ProteinID:
XP_038660147
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Position
8:complement(15168496..15894761)
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AA seq
619 aa
AA seq
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MKALDTMVDCIGKVMLHAAISCWQPFLGLALIVILTGSTMGCPARCECTAQSKSVTCHRK
RLTLIPEGIPIETKILDLSKNKLKNINPDEFASYTLLEVIDLSENIITIVEPGSFSNLFN
LRSLRLRSNRLKLIPLGVFSGLSNLTMLDISENKIVILLDYTFQDLRNLKSLEVGDNDLV
YISHRAFSGLLALQQLTLEKCNLTAVPTEALSHLHNLISLRLCHLHINAIHAYSFKKLYR
LKHLEIDHWPLLDVLPANSLHGLNLTSLSITNTNLSAIPYAAFKHLIYLAYLNLSYNPIS
IVESGMLQDLIRLQELHLVRAQLLTIEPRSFKGLHTLRVLNVSHNLLDTLEESAFQTVKN
LQLLCIDHNPLACDCRLLWMLQRRKALRFTQEQPICASPESIKGKRFQDFNDLYLPSYFT
CQKPQIPDKSPQHLVIDEGQVAQFSCHADGDPLPIISWQSPRRRLITLKSNGRVTVLGDG
TLELKFTQVQDSGVYICIASNAAGNDTFSVTLLVKGLSENLLGNKSSLYMTDLNDTHSNG
THVSMTVALDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYIPRKTN
GAAADTEQGGTRRFNMKMI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccttgacacaatggtggactgcatcggcaaagtcatgcttcacgcggccata
tcgtgttggcagccatttctgggcctggctctgatcgttattctcactgggtctacaatg
ggatgcccagctcgatgtgagtgcactgcacagagcaaatccgttacctgccatcgcaaa
cgcttgacgctgatccctgagggcattcctattgagaccaaaatattggacctgagcaag
aataagctgaagaacatcaatccagatgagtttgcgtcatataccttactggaagtaata
gaccttagtgaaaatataataacaattgtggaacccggatcttttagtaatctttttaac
ttgcgctccctacgcctgagaagtaaccggctaaaactcatcccacttggcgttttttct
gggttgtctaacttgacaatgttggacatcagcgagaataaaatagtcattttgctcgac
tacaccttccaggatttacgcaacttaaaatctcttgaagtgggggacaatgatttggtt
tacatttcacatcgagccttcagcggactgctggcacttcagcagttaacccttgagaag
tgcaaccttacagcggtgccaaccgaagcactgtctcaccttcacaatctcatcagcctc
cggctgtgccaccttcacatcaatgccatccatgcctattccttcaaaaagctgtatcga
ttgaaacacctggagattgatcactggcctctgctggatgtattacccgccaacagtctg
catggtctcaatctcacctccctgtccatcaccaacacaaacctgtctgcaataccctat
gcggcattcaagcacctaatttaccttgcgtacctgaacctgtcctacaaccccatcagc
attgtcgaatcgggcatgctgcaggatttgatacgacttcaagaactgcacctggttcgg
gcgcagttgctcaccattgagccccgttcctttaaagggctgcacaccttgcgggtccta
aacgtatcccataacctgttggacactctggaggagagcgcattccaaacggtgaaaaac
ctccaactgctctgtatagaccataacccactggcgtgcgactgccgactgctgtggatg
ctgcaaaggaggaaggctctgaggtttacacaagagcagccaatctgtgcctctccagag
agcatcaagggaaaacgttttcaagatttcaacgacctttacctgcccagctacttcacc
tgccagaaaccccagatcccagacaaaagtccgcagcacctggtgattgatgaaggccag
gtggctcaattcagttgtcatgccgatggggaccctctcccaattatctcctggcagtct
ccgcgcaggaggctgatcaccctcaagtcaaatgggagggtgacagtattgggagatgga
acactggaactcaagttcacccaggttcaggatagcggagtctatatctgtatcgcgagt
aacgcggccgggaatgacaccttctcagtgacgttgctcgtgaagggactttctgagaat
ctgcttgggaacaagagctctctgtacatgaccgatctaaatgacacacactccaatggg
acgcatgtgtccatgacagttgcactggatctaaagactatactggtgtccacggccatg
ggttgcttcacattcctcggcgtggtgttgttctgcttcctgctcctctttgtgtggagc
cgggggaagggcaagcacaagaacaacatcgacattgaatacattcctcgcaagacgaat
ggagccgcagctgacactgagcaaggaggcacgcggaggttcaacatgaagatgatataa
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