Scyliorhinus canicula (smaller spotted catshark): 119970234
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Entry
119970234 CDS
T11175
Symbol
atl2
Name
(RefSeq) atlastin-2 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119970234 (atl2)
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119970234 (atl2)
Autophagy
ER-phagy
ER-phagy recepters
119970234 (atl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Zincin_1
Motif
Other DBs
NCBI-GeneID:
119970234
NCBI-ProteinID:
XP_038660445
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All DBs
Position
1:186211963..186302529
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AA seq
579 aa
AA seq
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MAADSEWRGSRTCGGGGDGDVVEDETTTEDEFGSQEAAMNSDDVLMKEARPIQVVLAHED
NHHFDLDEESLERILLQEHIRDLNVVVVSVAGAFRKGKSFLLDFMLRYMYNQNPGTWLGG
DDEPLTGFTWRGGCERETTGIQVWSEVFVINKSDGSQVAVLLMDTQGAFDSQSTIRDCAT
VFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEVYQKPFQTLMFLIRDWSYP
YEHPYGLEGGKSFLEKRLEIKQNQHEELQNVRKHIHSCFAKITCFLMPHPGLKVATNPSF
DGRLKDIDGDFKKELRNVVPFLLSPENLVEKEIGGSKVTCRDLVEYFKAYIKIYQGEELP
HPKSMLQATAEANNLAAVAGAKDVYAKGMEMFCGGDKPYIAPADLEQQHLTLKEASIKQF
RSIKKMGGEEFSRRYQEQLEQEMDENYANFVKHNDSKNIFYAARTPATLFAVMFTMYIIS
GVTGFIGLNSIASLCNLVMGIALISLCTWAYTKYSGEFREFGAIIDQVAETIWEQRSPKK
VLKPLSDNLMEDNIRQTVANSIKAGLTEQGSQHTKLKTN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacagcgagtggagagggtcacggacctgtggcggcggcggcgacggcgac
gttgttgaagacgagaccaccactgaagatgagtttggtagccaagaagctgctatgaat
tcagacgatgtactcatgaaagaagcacgaccgatacaggtagtattggcacatgaagat
aatcatcattttgatcttgatgaagaatccttggaacgaattctattgcaagaacacatt
cgggacttgaatgttgtggttgtctctgtggcaggagcatttcgtaaaggcaaatcattt
ttgttggacttcatgttgcggtacatgtacaatcagaatcctggtacatggctcggtgga
gatgatgagccgttgaccggctttacttggcggggtggatgtgagcgtgaaactactggt
atacaagtttggagcgaagtttttgtaatcaataagtctgatggaagccaggttgcagtg
cttttaatggatactcagggggcctttgacagtcagtcaaccataagagactgtgctaca
gtgtttgctctcagcaccatgactagttctgttcaggtatacaatttgtctcagaacatt
caagaagatgatctgcagcacttgcagctcttcaccgaatatggccgactggcaatggaa
gaagtatatcaaaagcccttccagactcttatgtttttaataagagattggagctatccc
tatgaacatccgtatgggttggaaggaggcaagagcttcttggaaaaacggttggagata
aaacaaaaccagcatgaagagttgcagaatgtgaggaaacatattcattcctgttttgcc
aagatcacctgcttcctaatgccgcatccaggtctgaaagttgccacaaatcctagtttt
gatggaagattaaaagatattgatggtgatttcaagaaggagctccgtaatgtggtgcca
tttctgctgtctcctgaaaatttagtagagaaggaaataggagggtccaaagtgacttgt
cgagatcttgttgaatatttcaaggcttacatcaaaatttaccaaggggaggaactacct
catccaaaatctatgctacaggcaacagctgaagccaacaatctagctgctgttgcagga
gcgaaagatgtctacgccaaaggcatggagatgttctgtgggggagataagccttatata
gcaccagcagatctggagcaacagcacctgaccttgaaagaagcttctatcaagcagttt
cgatccatcaagaaaatgggtggggaagagttctctcggcgctaccaagagcaactcgag
caagaaatggatgagaactatgcaaactttgtaaagcacaatgacagcaaaaatatattt
tatgctgcccgcacacctgccacactttttgctgtgatgtttaccatgtacataatctca
ggagtgactggattcattggtttgaactcgatagcttctttatgcaatcttgtgatgggg
atagctctaatatccctctgcacctgggcttacactaagtattctggtgaattccgagaa
tttggagcaatcattgatcaagtggctgaaactatatgggaacagaggagtccaaagaag
gtgttgaagccactgagtgacaatttgatggaggacaacataagacagactgtagcaaac
tccatcaaagcaggtttgactgagcagggctcccaacataccaaattaaagacaaactga
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