KEGG   Scyliorhinus canicula (smaller spotted catshark): 119970240
Entry
119970240         CDS       T11175                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119970240 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scau03021]
    119970240 (polr1e)
Transcription machinery [BR:scau03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     119970240 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 119970240
NCBI-ProteinID: XP_038660461
LinkDB
Position
8:complement(50373318..50421343)
AA seq 417 aa
MMAAVSVWKYRDIEELGPEQSATLVQFSNGKLTNSENVAFQLHKNIHTHNPRKKNQLILS
AETDRLMYVGNNFGPSALKCNSLCKYFVGVLNKTTGKMEVCDAQLFNMQPFFHGESATEG
DTKEKHTSYREKVDSLIEAFGTNKQKRALSSRRMNQVGNETLQKAVAKAAENIIEKKGVT
ALASEAMLIESQDQSTFLPPCHADAHKPEDVYKFEDLISPPEYQAIKAHCSPLKISTEEE
ICKLAQTGNYSSFVLESLKSLPQDEDSRDHRCSCLFYLQILIRLHNLKNHEFKHKGSLGG
DVAEVVKNSLMKNFTVLTYNNGRIKNVMPTSMKAKIVAYIIALALHINSFQTDLTFLQRD
LNISENRILDIARAMGLKIAKKKVDMSGGTAEDHKIATLSLPLAVRSKPQGRKRRKM
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgatggcggcggtcagtgtttggaagtacagagatatagaggagttgggtccggaacaa
tcggccacacttgttcaattttccaatgggaagctcaccaattcagaaaatgtggcattt
cagctgcacaaaaatatacacacacataacccccggaaaaagaatcagcttatcttgtct
gcggagaccgatagattgatgtacgttggaaataattttggacccagtgccctgaagtgt
aactcgttgtgcaagtactttgttggcgtgctaaataaaacaacagggaaaatggaggtg
tgcgatgctcagctgtttaacatgcaacctttctttcatggtgaatctgctacagaagga
gataccaaagaaaaacacacctcttacagggagaaggtggattccctcattgaggcattt
ggcactaacaagcagaaacgtgccttgagctctcgcagaatgaatcaggttgggaatgag
actttgcagaaagctgtggccaaagcagcagaaaatataattgaaaagaaaggagtgaca
gctttagctagtgaggcaatgctgatcgagtctcaggaccagtcgacctttcttcctccc
tgtcacgctgatgcacataagcctgaagatgtttacaaatttgaggacctcatctcacct
cccgagtatcaagcaatcaaagcacactgctcaccgctgaagattagcactgaagaagaa
atttgcaaactggcacaaaccggcaactattcctcctttgtcctggaatcactaaaatcc
ttacctcaggatgaggacagtcgtgatcataggtgttcctgcctgttttacttgcagatt
ctgatcagattgcacaacctaaaaaaccacgaattcaagcacaaaggttcccttggaggt
gatgttgcggaagtcgtaaaaaacagtttgatgaaaaatttcacagtcctgacttacaac
aatggacgtataaaaaatgtgatgccaacctccatgaaagcgaagatagtggcatacatt
attgcattggctttacatatcaacagctttcaaactgacctcacatttctacagcgggat
ttaaacatcagtgaaaatagaattttggacattgccagagcaatgggtttaaagattgca
aagaaaaaggtggatatgtcaggcggtactgcagaggaccataaaatagcgacactatca
ctaccattggctgtgcgaagtaaacctcaaggtcgcaaaagaaggaaaatgtaa

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