Scyliorhinus canicula (smaller spotted catshark): 119970246
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Entry
119970246 CDS
T11175
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119970246 (pax5)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119970246 (pax5)
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GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Homeodomain
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
119970246
NCBI-ProteinID:
XP_038660474
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Position
8:51138945..51435099
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AA seq
425 aa
AA seq
DB search
MEINGSALRSVRSGEGVKSRPGNRGFLRVEDRLRLFMEIHCKHDPFAAMHRHGGVNQLGG
VFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGG
SKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKVQQ
PPNQQSPVTSHTIAPSTVAVTPVPSAATDPAGSSYSISGILGITPSSAENNKRKRDEGAQ
ENPMHNGHSHPSRDFLRKQMRGELFTQQQLEVLDRVFERQHYSDIFTTTEQIKSEQNAEY
SAMASLAGGLEDMKSSLTNSADIGASVPGPQSYPIITGRDLASTTLPGYPPHVPPAAQGS
YPAPTLTGMVPGSDFSGSPYSHPQYTTYNDSWRFPNAGLLSSPYYYSTASRGSAPAAAAT
AYDRH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaacggcagcgcgctcaggagtgtccggtcaggtgaaggggttaaatccaga
ccaggaaatcgaggttttctccgagttgaagaccggctgcgccttttcatggaaatccac
tgtaagcacgacccgtttgcagcaatgcataggcatggcggggtgaatcagctcggaggg
gtctttgtgaatggtcgccccctccccgatgttgtccgacagcggatcgtggagctggcc
caccaaggggtgcgaccctgtgacatctccagacagctcagggtgagccacggctgcgtt
agcaagatactgggcaggtattatgagactggaagtattaagccaggcgttattggagga
tccaaaccaaaggtcgctacacccaaagtggtagataaaatcgccgactacaagcgccaa
aatcccaccatgtttgcctgggagattcgagacagactgttggcagagagagtctgtgac
aatgatacagtgcctagtgtcagttctattaacaggatcattcgaacaaaggtgcaacag
cctccaaaccagcaatcgccggtcacatcccatactatagcaccaagcacagtggcagta
actccagttccttctgctgccacagaccctgcgggatcttcttattccatcagtggaatt
ctggggattacaccttccagcgctgagaataacaagagaaaacgtgatgaaggtgctcag
gaaaacccaatgcacaacggacactcccacccaagccgggattttctgcggaaacagatg
cgtggcgagctcttcacacagcagcagctagaagtgttagacagagtctttgaaagacag
cactattcagacatcttcacaactacagaacagatcaagtcagagcagaatgcagagtat
tccgccatggcatcactggctgggggactggaagatatgaagtcgagtctaacaaattca
gctgacataggagccagtgtcccagggcctcagtcttaccccattataacaggtcgcgat
ctggccagtacgactcttcctggctacccgccgcatgtgccccctgctgcacagggcagt
tatccagccccaacactgacagggatggtgcccgggagtgatttttctgggagtccatat
tcccatccgcagtatacaacttataacgactcctggagatttcccaatgctggattatta
agttccccctattattacagcaccgcatcccgcgggtcagcaccagcagctgccgctaca
gcctacgatcgtcactag
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