Scyliorhinus canicula (smaller spotted catshark): 119970282
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Entry
119970282 CDS
T11175
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119970282 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119970282 (slc1a1)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
119970282 (slc1a1)
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GFIT
Motif
Pfam:
SDF
CDC48_2
Motif
Other DBs
NCBI-GeneID:
119970282
NCBI-ProteinID:
XP_038660581
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Position
8:complement(61591502..61688459)
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AA seq
525 aa
AA seq
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MPVFPLGFDHQPGMGKRILNRFDLKSILKKNWLLLSTIAAVITGIVTGFLVREYTTLTSL
GKYYFGFPGELLMRMLKMIILPLIVSSIITGVATLDSGVSKKIGARAVIYYFSTTITAVV
LGIVLVMAIQPGVSQSADSIRRHGNLPQITTIDAMFDLLRNAFPENLIQASFQQYKSKRV
AIKPVINSTAGSTNETKVTDYKVVGMYSYGLNVLGIIVFCLVFGIVIGQMGEKGKILFDF
FEALNEATMKIVQIIMCYMPIGILFLIAAKVIQVDDWEIFRRLGLYMATVLIGLAIHGAI
ILPAIYFIVVRKNPFIFIAGMAEALLTSVMISSSSATLPVTFRCAEEKNKIDKRITRFVL
PVGATINMDGTALYEAVAAIFIAQLNDYPLDAGQIVTISVTATAASIGAAGVPQAGMVTM
VIVLTAVGLPANDVTLIIAVDWLLDRFRTMVNVLGDSFGAGIVEKLSGKELQQGDAQNGM
NIVNPFALETSASEKDEPKIRETYINGAFDVDKSDSVAVTETSQF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtttcctctgggtttcgaccatcaaccaggcatggggaagagaatcctaaat
agatttgatcttaaatccatcctgaagaagaactggttgctcttgagcacaattgccgct
gtaatcacaggtattgtgacagggtttctggtgcgagaatatactactttgacaagccta
ggcaaatactactttggatttccaggagaactcctgatgagaatgctgaagatgatcatt
ttacctttaattgtctccagtataattacaggagttgccacgttggattcaggtgtctcc
aagaaaattggagcacgggctgtaatatattacttttcaaccacaataaccgctgtagtt
ctaggaattgtgttggtgatggccatccaacctggtgtctcccaaagcgctgactccatt
cgcaggcatggaaatttaccacagatcaccactatagatgccatgtttgatctccttcga
aatgcattcccagaaaacctgattcaggccagctttcagcagtataaaagcaaacgagta
gcaattaaacctgttattaattccaccgctggctcaacgaatgagactaaagtcactgac
tacaaagtggttggcatgtactcttatggactcaatgtactgggcatcattgtcttctgc
ctagtgtttgggattgtcattggacagatgggcgaaaaagggaaaattctcttcgacttc
tttgaagcattgaatgaagccaccatgaaaatcgtacagatcatcatgtgctacatgccg
ataggtatattatttctcattgctgcaaaagtaatacaagtggatgactgggaaattttc
cgtagacttggactttatatggctacagtgctgattggattggccatccatggtgctatt
attctacccgcgatctattttattgtggtccgaaaaaatcccttcatattcattgcagga
atggctgaagcattacttacatcggtcatgatttcatccagctccgcaactttgccagta
acattccgatgcgcagaggaaaaaaacaaaatagacaaaaggatcacaagatttgtgttg
ccagtgggagccacaataaacatggatggaacagctctgtatgaagcagttgctgcaata
tttattgctcagcttaatgactatcctttggatgcaggacagatagtcaccatcagtgtt
acagcaactgcagccagtataggagcagctggagttcctcaggctgggatggtcaccatg
gtgattgttcttactgcagttggattacctgctaatgatgtcactctgatcatcgccgta
gattggcttctggatcggtttcggactatggtgaatgtacttggagattcatttggagct
ggaattgtggagaagttgtctggaaaagaattgcaacaaggggatgcccaaaatggcatg
aatatagtgaatccatttgctttggaaacttctgcatctgagaaagatgaaccaaagata
agagaaacatacattaatggggcatttgatgttgataaatcggactctgtagctgtcaca
gaaacatcacaattttga
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