Scyliorhinus canicula (smaller spotted catshark): 119970310
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Entry
119970310 CDS
T11175
Name
(RefSeq) chondroitin sulfate synthase 3-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
scau01100
Metabolic pathways
Module
scau_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119970310
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119970310
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
119970310
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
119970310
Glycosyltransferases [BR:
scau01003
]
Glycan extension
O-Glycan
119970310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Phage_TAC_13
Motif
Other DBs
NCBI-GeneID:
119970310
NCBI-ProteinID:
XP_038660641
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All DBs
Position
8:70127974..70396270
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AA seq
830 aa
AA seq
DB search
MAGRARRPWLSVVLGLVLGFTAASWLIVPRVVEINGKNKKIFNICSSLLNRAGIGRAIGG
SSSSSSSRSLGWHKDNLLFSKLPKEDQTQEEEEDEEEEGEEAARGNNGHRASGNSKRFLY
VGVMTAKKYLDSRSVAAYRTWASSIPGKVEFFSSQGSQDILTPVPIPLISLPGVDDSYPP
QKKSFMMLKYMHDLYLERYEWFMRADDDVYIKGERLEELLRSLNSSQPIYLGQTGLGTTE
ELGKLALEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEIGRCVRRFANT
QCVWSYEMQQLFYENYEHNKKGYIQDLRSSKIHNAITLHPNKRPDYQYRLHNYLLTRKVS
ELRHRTIQLHRESVSMSKLSNTEVRKEDQQLGMMPSFMRFQPHDRDEVLEWEFLTGKHLF
SMAETQIPRQGINSALRAALDDTIMQVMEMINWNSKTRGRVIEFKEIQYGYRRVNPMHGA
EYIMDLLLLYKKHKGRKVTVPVRRHAYIQQSFSKAFMKEAEELDARELAESINSDSQSFS
FLSNSLKIFSPFQFTETTKELKQRNDQKVHILVPLAGRYDTFVRFMENFEKTCLIPKQNV
KLFILLFNSDSIPDKGKHMELMGELNLKYPKADMTILPMKGEFSRGLALEMGSSSFHNDS
LLLFCDIDLIFTPDFVQRCRDNTIQGEQVYFPVIFSQYDPKIVYGGNPINDNNFVFTKKT
GFWRDYGFGIVCIYKSDLLHVGGFDTSIQGWGLEDVDLFTKVISAGLNAFRSQEIGVVHV
YHPVHCDPNIDPKQYKMCLGSKASTFGSTMQLAELWLEKHLNGGYNRTIS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctgggagagctcgcagaccatggctgagtgttgtgctagggctggtgctgggcttc
accgccgcttcgtggctcatcgtccccagggtggtggaaatcaacggcaagaacaaaaag
atcttcaacatctgctcctcgttgctgaacagagcaggaattggacgggcgatcggtggc
agcagcagcagtagcagctccaggagcctgggctggcacaaagacaacctcctgttcagt
aaactgcccaaggaagaccagactcaggaggaggaagaggatgaggaggaggaaggtgag
gaagctgcgaggggcaacaatggccaccgtgccagcggcaacagcaaacgtttcctctat
gttggggtgatgacggccaagaagtacctggactctcgctcggtggctgcctacaggacc
tgggcttcctccatcccgggcaaagtggagttcttctcgagccagggctcccaggacatc
ctcacccctgtccccatccccctcatctccctgcccggggtggatgactcttaccctccc
cagaagaagtccttcatgatgctgaagtacatgcacgacctatacctggagcgctacgag
tggttcatgcgggcggacgacgatgtctacatcaaaggcgagcggctggaggagctgctg
aggtctctcaacagcagccagcccatctacctgggacagaccggcctgggcaccaccgag
gagctgggcaagctggccctggagcccggggagaacttctgcatggggggacccgggatg
atattcagccgggaggtgctgcgccggatggtgccgcacattggcgagtgcctgcgggag
atgtacaccacacacgaggacgtggagatcggccgctgcgtgcggaggttcgccaacacc
cagtgtgtctggtcttatgagatgcagcagctgttctatgagaactatgagcacaacaag
aagggatacattcaggatttacgcagcagcaagattcataatgcgataacactccatccg
aacaaaagacctgattatcaatatagattacataactacttgctgacgcgcaaagtttca
gaactacgccatcggaccattcagttgcatcgcgaaagtgtctctatgagcaagctgagc
aacactgaagtgcgaaaggaggatcagcaacttggaatgatgccatcttttatgcgcttt
cagcctcatgacagggacgaggttcttgaatgggaatttctgactgggaaacacctgttt
agcatggcagaaacacaaatccctcgccagggtatcaacagtgcgctgcgtgcagccctg
gatgacactataatgcaggttatggaaatgatcaattggaactcaaagacgagggggcgt
gtgattgaatttaaagaaattcagtatggctatcgcagagttaaccccatgcatggagca
gagtacatcatggatctgttgctactttacaagaaacacaaggggagaaaggtgactgtt
cccgtaagacgccatgcctacattcaacaatcattcagtaaagcattcatgaaggaagct
gaagaacttgatgccagagagcttgcagaaagcataaacagcgactctcagtccttctca
ttcctttcaaactcactgaaaatcttctcaccattccaattcaccgagaccaccaaagag
ctcaaacaacgcaatgaccagaaagtccacatcctagtccctctcgctggaaggtatgat
acgtttgttcggttcatggagaactttgagaagacttgccttattccaaagcagaatgta
aaactattcatattgttgttcaactctgattcaatcccagacaaaggcaagcacatggag
ttaatgggagaacttaaccttaaatatcctaaagcagatatgaccattctccctatgaaa
ggggaattctccaggggcctagccctagaaatgggctcctcttcattccataatgacagt
ttgctgctcttctgcgatatcgacttaatttttactccagactttgtgcaacgatgtaga
gacaatacaattcagggagaacaggtttattttcctgtaatctttagtcagtacgatcca
aaaatagtttatggtggtaacccaataaatgataataactttgttttcacaaagaagacc
ggtttctggcgagattatggctttggaatcgtttgcatatacaaaagcgatttattgcat
gttggtgggtttgatacctccattcagggttggggattagaagatgtggacctttttact
aaagtgatctctgctggcttgaacgcctttagaagccaggaaattggggttgtccatgtt
tatcaccctgttcactgtgatcctaatatagatcctaagcaatataaaatgtgcttaggg
tccaaagcaagtacatttggatcaacaatgcagttggctgaactctggcttgaaaaacat
ctaaatggcggatacaacagaactatatcctga
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