Scyliorhinus canicula (smaller spotted catshark): 119970343
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Entry
119970343 CDS
T11175
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119970343 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119970343 (fancc)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
119970343 (fancc)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
119970343
NCBI-ProteinID:
XP_038660727
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Position
8:79261605..79464456
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AA seq
566 aa
AA seq
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MAEDTSISASSFEYWLNKAVEWGNTTTFESQQDVCRHLPKLQAFLKQIYGAIQHMNVTSV
LKLFPLIGQLLGRLCWNPFVVAHEESHQNLLQCLWCLYSAEPENAVELKANEWIWTLLQS
MTGVDHEVRSFVQSLHYPDGEYHSKLLKNMVSSLVKELQGCQCDRSSLFPRFPPDRLRGY
SVLCLPIVTLPEAFPLVEALLTCHEDGLDESLSAEFLESVSNGLLQKKIFLSEAAVMSLW
LRSLPSLEQGFFHLIETLISQPCASLLEVEAIITDSLLPKAAACHPSLFRVIDDFFRTIL
LESDGHPKIIIIIQAFMRCFVQALLQMQPQMPLKIYFPCNHQPLVMALLVNPSEMPSAAW
SQHLMSIIQILKEIVEDEEVTRTSVNLFENWFLLAHFGDWVNVALQQLMMADDISEMLLW
LLMFYYEPHMENQKENHSQENMKSVYNQIKTLSNKSTLNLEDLRTALFTGNLCTEQNHLK
ELINHLLVSFLLFSAGGHRIAKESVQLFAGAAAGGISELLASTAHRLKNKRCGASKDDTV
QSTIELLQQQLLETQSERVQSSDILH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatacttccatttcagcttccagctttgagtactggttgaataaggctgtt
gagtggggcaacaccaccacttttgaatcgcagcaagatgtctgccgacacctgcctaaa
ttacaggcgttcctgaagcagatttatggagccatacagcatatgaatgttacttcagta
ttaaaattatttccactgattggccaattattgggcagactttgttggaatccatttgtc
gtagcacatgaggagagccaccagaacctgttacaatgcctgtggtgtctctacagtgca
gaacctgagaatgctgtggaactgaaggccaatgaatggatatggaccttgctgcagagt
atgactggtgtcgatcatgaagtaagaagttttgttcagagtttacattatccagacgga
gaataccattctaaattgttgaaaaatatggtctcctctttagttaaggaacttcaaggc
tgtcagtgtgatagaagttccttgtttccaaggtttccaccagaccgactgaggggctat
tctgttctctgcttacctattgtcaccttacctgaggcctttcccttggtggaagctctt
ctgacttgtcatgaagatggtttggacgaatctcttagtgcagaatttctagagtctgtc
agcaatggccttctgcagaaaaagattttcttgtctgaggctgcagtgatgagcttgtgg
ctgcgttccctccctagtctggaacaaggttttttccatcttattgaaactttgatttct
caaccgtgtgcatctttactggaagttgaagctattatcacggattcattgctgcctaaa
gctgcagcctgtcatccttccttattcagggtaattgatgattttttcaggaccattcta
ctggagtctgatgggcatcctaaaattatcatcattatacaagcatttatgcgctgtttt
gttcaagctctgctgcagatgcaacctcagatgccattgaagatctactttccgtgtaat
caccaacctcttgtgatggcactactagtgaatccttcagagatgccatcagctgcctgg
tcccagcacctaatgagcattattcaaattttgaaggagattgtagaagatgaagaagtc
acccgaacctctgtaaatctatttgagaattggtttttactggcacattttggagactgg
gtaaatgttgccttgcagcaattgatgatggcagacgatatctcagagatgctgctttgg
cttttgatgttctactatgagccacatatggaaaaccaaaaagagaatcactcacaggaa
aacatgaaatctgtgtacaatcaaataaagacactaagcaacaagtcaaccttgaatctt
gaggatctgcggactgctttattcactgggaatctctgcacagaacaaaatcaccttaag
gagctaatcaatcacctcctcgtgagctttttattattttcagctggtggacacagaata
gcaaaggagtctgtgcaacttttcgctggagctgccgctggtggaatttcagaattactg
gctagtactgcacacagactaaagaacaaacgatgtggagcatctaaagatgatacggtg
caaagcactattgaactcctgcaacaacagttactggaaacacaatctgaaagagtgcaa
tcaagtgatatcctccactga
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