KEGG   Scyliorhinus canicula (smaller spotted catshark): 119970398
Entry
119970398         CDS       T11175                                 
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
  KO
K08533  RAR-related orphan receptor beta
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:scau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:scau03000]
    119970398 (rorb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:scau03310]
    119970398 (rorb)
Transcription factors [BR:scau03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    119970398 (rorb)
Nuclear receptors [BR:scau03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   119970398 (rorb)
SSDB
Motif
Pfam: zf-C4 Hormone_recep Pentapeptide_4 OmpH
Other DBs
NCBI-GeneID: 119970398
NCBI-ProteinID: XP_038660879
LinkDB
Position
8:complement(94729817..94988489)
AA seq 475 aa
MCQTQQKMKTEVITQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYTNSISNGLTDLNNEIGGTYSNGHVIDLPKVQSEGANGYYSVDSAQPS
PDQSGIDMAGIKQIKQEPIYELTPVPNLFTYSSFTNGQLAPGVTMTEIDRIAQNIIKSHL
ETCQYTMEELQQLAWQTHTYEEIKVYQNKVREVIWQQCAIQVTHAIQYVVEFAKRITGFM
DLCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQTFKALGCDDLVSAVFD
FAKSLCSLQLTEEEIALFSAAVLISPDRPWLMEPRKVQKLQEKVYFALQHVIHKNHLDDD
TLAKLISRLPTLTALCNLHTDKLQAFKLLHPETANSLFPPLYKELFNPDSSAIPK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtgtcaaacacagcagaaaatgaaaactgaagttataactcaaattgaagtgatacct
tgcaaaatctgcggtgataagtcctctgggatccactatggagtcatcacttgtgaaggc
tgcaagggattctttaggaggagtcagcagaacaatgccgcttactcctgtcctcgacag
aggaactgtttaattgatcgaacaaatcggaatcgttgtcaacattgtcgtctgcagaag
tgtcttgcccttggaatgtctcgagatgctgtaaaatttggtagaatgtccaagaagcaa
cgtgacagtttatatgctgaggtccagaagcaccaacagaggctgcaagaacaacggcag
cagcaaagtggcgaggcagaagcccttgcccgtgtctatacaaacagcatcagcaacggc
ttgacagacctgaacaacgaaattggtggcacttactcaaatggacatgtaattgatctg
ccaaaagtacaatctgagggagctaatggatattacagtgtagattctgctcaaccgtca
ccagatcagtctgggatagacatggctggaatcaagcaaataaaacaagagcctatttat
gaactcacacctgtaccaaacttgtttacgtatagctcttttacaaatggtcaactggct
cctggagtaacaatgactgaaatagatcgcatcgcacaaaatattataaagtcccacttg
gagacatgtcagtatacaatggaggaacttcaacagttggcatggcagacgcacacatat
gaagaaataaaagtttaccaaaacaaggtgagggaagtcatatggcagcagtgtgcaatt
caggtcacgcacgcaattcagtatgtagtcgagtttgccaaacgcattacagggttcatg
gacttgtgtcagaacgatcaaattctccttctcaaatcaggttgtttggaggtggtgttg
gtcagaatgtgccgtgcctttaatccactgaacaacacggtactttttgaaggaaaatat
ggaggcatgcaaacattcaaagctcttgggtgtgatgatctagtcagtgctgtgtttgac
tttgcaaagagtttgtgctcccttcagctgactgaggaagaaatagctttgttttcagct
gctgttctgatatcaccagatcgaccatggttaatggaaccaagaaaagttcaaaaactc
caggaaaaggtttattttgcactacagcatgtgattcataaaaatcacctggatgacgac
acattagcaaagttgatctccaggttaccaactttaactgcactttgcaacctgcacact
gacaagctccaggcattcaagctgttgcacccagagacagccaacagcctgtttcctcct
ctctacaaggagctctttaacccagactcttcagccatccccaagtga

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