Scyliorhinus canicula (smaller spotted catshark): 119970466
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Entry
119970466 CDS
T11175
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119970466 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119970466 (wdr36)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119970466 (wdr36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR11_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
119970466
NCBI-ProteinID:
XP_038661048
LinkDB
All DBs
Position
8:complement(115587623..115770886)
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AA seq
893 aa
AA seq
DB search
MSRGKGSSVFSGYRALALYCNQVPHVVRLHQKHREFYLVTAVGAAFHTYNVKRLGIVAVS
NSLPEDIACLAADRMLVFAAHGNSVKAFARNKEIVHSYKGHNAEVHLLLTFGDHLISVDR
DNRLIVWDVQSEEEYLQLNFDKISFTVSALLHPSTYINKILLGSQQGSLQLWNIKSNKLL
YTFQGWGSGVSVLQQAPAVDVVAVGLTSGQIIIHNLKYDEMLMKFQQDWGPITAISFRTD
GYPVMAAGSPMGHVGLWDLEEKKLIGQMREIHTTAISGLTFVHGEPLLITTGEDNAIRVW
IFDAPEGGGRLLRCRIGHSAPPTKIKYHGSDGKNILSSGRDGTLQSFSTIHERFNKSLGQ
GSINKKKSKKKGLKYDTLKLPPITTFASESARQSYWDGIIACHQGYLISTTWNYQQTSMG
AHKLEPKRYLKDRTLDVCSTAVDITSCGNFAVVGLSSGHVDVYNLQSGIHRGQYGKEKAH
EGQIRGVAVDGLNQLTITAGGDKMIKFWKFKSKELMYTTTLDAPPASILLHRDSGMLAVA
MDDFGIAILDSETRKFVRRFTGHQNQINDMTFSPDSRWLISASMDCTIRTWDLPSGCLID
CFLLDSAAVSITMSPTGDFLASAHVDDLGIYLWSNKTLYNIISLRPLPVDYQPSIVMLPG
VCQQQELEISDNDEEIEDQMIEYDSLEQLGEQLVTLSLLPESRWKNLLNLDVIKKRNKPK
EPPKVPKSVPFFIPTVPGLVPHFAAVEQQTAEDQSKVVNLGILAQKTELYRQLEDALNTN
NYNHAVKLLKEMGPSSIDIEFRGLAPEGGGSLEVMLSFLKMISYMLDSKRDFELVQAYLA
LYLKLHLKIIAVEPVLLEEMSKVSVLLDETWTHMQTLFTQSMCLLGYMKSALL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggtaaaggaagcagcgttttcagcggataccgggcattggcgctttactgc
aaccaggtcccacacgtggttcggctccaccagaagcaccgagagttttacctggtaaca
gcggtgggggcagctttccacacctataatgttaaaagacttgggatagttgcagttagt
aattcgctccctgaagacatcgcttgtttggcagcagaccgaatgcttgtgtttgcagct
catggcaactctgtaaaagcatttgccagaaacaaagagattgtgcattcatataaaggc
cataatgcagaggtccacctcctgttgacctttggtgatcatttgatctcagtggatcga
gataacagactgatcgtttgggatgtgcaatcagaggaggaatatcttcaactgaacttt
gataaaatcagctttacagtttctgcccttttgcacccaagtacctatatcaacaaaatt
cttcttggcagccagcaagggagtcttcagctatggaatatcaagtccaacaaactttta
tatacctttcaaggatggggctcaggagtatctgtgcttcagcaggccccagctgtggat
gtagttgctgtcggcctcacatctggtcagataataattcataatctgaaatatgatgag
atgttgatgaaatttcaacaagactggggaccaatcacagcaatatcatttcgcacagat
ggttatccagtgatggctgctgggagtcctatgggtcatgttggactatgggatttggag
gaaaagaagctgattggccaaatgagggaaattcatacaacggctatttcaggactaaca
tttgttcatggagaaccactcctcattaccactggtgaagacaatgcaatccgggtctgg
atttttgatgctccagaaggtggaggtcgccttttacgatgccgtattggacacagtgcc
cctccaaccaaaataaaatatcatggatctgatggaaaaaacatccttagctctggacgg
gatggaactttgcagtcattttccactattcatgaacgttttaataagagtttgggacag
ggttccattaataaaaagaaatccaaaaagaaagggttgaagtatgatacattgaaacta
cctcctattactacgtttgcttcagaatcagcacgtcaaagttattgggatggaattatt
gcctgccatcaagggtatctaatcagtacaacatggaactaccagcaaacctcaatggga
gcacacaaacttgaacctaagagatatcttaaagatcgtaccctggatgtatgttctacg
gctgtggatataacatcgtgtggaaattttgctgttgttggcctttcttcaggccacgtg
gatgtatataacctgcaatcaggcatccacagagggcagtatggcaaagaaaaggctcat
gaaggccagatccgaggagttgctgttgatggactgaatcagctcacgatcactgctggt
ggggataaaatgatcaagttttggaagtttaaatcaaaggaattgatgtatacaacaaca
ctagatgcaccgccagctagcattttgctacatagagacagtggcatgttggctgttgct
atggatgatttcgggatagcaatcctggatagtgaaacgagaaaatttgtgagaagattc
accggacatcagaatcaaataaatgatatgacctttagtccggacagtcgttggttaatt
tctgcttcaatggactgtaccattaggacctgggatcttccatcagggtgcttaatagac
tgtttcctgcttgattcagcagctgtcagtatcaccatgtcccccactggagacttcctg
gcttctgctcatgtagatgatttgggaatttacctttggtccaacaagacgctttataat
attatttcccttcggccactgcctgttgattatcaaccttcaattgtaatgcttcctgga
gtgtgccaacaacaagagctggagatttcagacaatgacgaggaaatagaagaccaaatg
atagaatatgattcattggaacagctcggagagcagttggtcactctctctttgcttcca
gaatcacgctggaagaatctcctcaaccttgatgttatcaagaaaaggaataaacccaag
gaaccacctaaagtgcccaaatctgttcctttcttcattccaactgttcctggcctcgtg
cctcattttgctgctgtagaacaacaaactgctgaggaccagtcgaaagtggtaaatctg
ggcatattggcgcagaaaacagaattgtataggcagctcgaagatgctctgaacaccaac
aattataaccacgctgttaaacttttgaaagaaatgggaccatcgagtattgacattgag
ttcaggggcttggccccagaaggaggcggttctttggaggtgatgctgagctttctgaaa
atgatcagctacatgcttgacagcaaacgggattttgagttggttcaggcttacctggca
ttgtacctaaagctccatctcaagattattgctgttgaaccagtgctattagaagaaatg
tctaaagtatcagtgttgctggatgaaacatggacacatatgcagacacttttcacccaa
agcatgtgccttttgggatacatgaaaagtgctctattgtag
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