Scyliorhinus canicula (smaller spotted catshark): 119970504
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Entry
119970504 CDS
T11175
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119970504 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119970504 (ttc37)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119970504 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_16
TPR_11
TPR_12
TPR_17
TPR_7
ANAPC3
TPR_30
YceG_bac
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
119970504
NCBI-ProteinID:
XP_038661172
LinkDB
All DBs
Position
8:130048420..130179068
Genome browser
AA seq
1567 aa
AA seq
DB search
MSNKEVKAILKNAREAIRNKEFKEALKHCKAVLKQDKTNYNAWVFIGVAAAELEQPDQAK
TAYKKAAELDPDQLLAWQGLLNLCEKNDTSDNKHELLGIYQKLMKLYESSDKQKWHDVCL
KLVDLYHQENKYLEVAKTWSRMIQLKQQDGADKQELHHLWRKMIQLLADKVESQDNETQQ
LLKTAFENVLSSMDKIPSDNHQKLSTEYIKFLSKLSHEEDKLKLACEALLSQYPNSTSTL
EVLSMHFIQTECFSEEALQCYSRLNKMEPTNGLGLIGVGIKAMQEKKYDEATKNLTEGLK
QARSAITAWFYLAKIQLLMHKYEETISSCRQGLELLESSVRDGNTQQKHKLLHLQAEAMV
RSGDPNNAQKVFGILEQLPDSNEPTLLAMKGQAYLSKGLMKPASQIATDLMASYPDLAET
WKLQGLINYTQKNYVQAEQCFHKAVKIKADCGEYYYYLGLTYWFMGEAMRKDKTKTATHL
LKAARLDTYNGRIFCYLGHYYQDIVQDKSRARGCYKKAFELNNSDEEAGAAAVDLSVELG
DMETALGILRTVTDHSSAGTAKWAWLRRGLYYLRTNQHSQAVADLQAALRADLNDSNCWE
CLGESYLSRGGYNAALKAFTKASELNPKSVYNIYKIAAIKQILGKYAEANTEYKQIIQNT
KNYVPALKGLGECYLMMTRNALDDCLDGRALDSTEEALQYLARAVLCRPDVSCLWKLIGD
TCTTLHALSPTKVNVKVSAVLIGQNEKSSIQSLNKNELLRLGGRCYGRALTLMSTSANLW
CDLGMNYYRQAQQHLVAAGEVNIVPEFIEKALQCLKKSVMLDSKNHLYWNTLGVIASYKG
FENYALAQHAFIKSVQVEQNNVVAWTNLGATYLKNKSIELAHEAFKVAQSLEPSYVRCWI
GQALIAESVGSYETMDLFRHTTELGVNTEGAKGYAHWVCTTLQDKSNRNSELYKYNIVQM
NAIAAAQVAMSKYTERIQTDATAFTMLGYLNEYLNLKKQAAEAYHRVVVLLQNTEDEEKL
KYAQRNWIRALCTAGQYQDAIQAHMLNPLVEFDDIVSLALAYMKEGLLQESAKVYEKALT
IARTEKEKAHIMIALAMIAFKEGRMDSAKTLLFKCSMLKEPSIESLQALCALGLSKKDTT
LATAALNELFKHLDKINSTYETCLLSSGMFYLQANSVAVQRQAAKAIHCNPADPALWTLL
SRLVPQHTPQMAEAGAVAGNIAQILSSHQTKNALLCSAVNQLAAGKHAADNNKDNALKTI
QKAVHLYPDDPAVWAVLMAACHTEKTLSHLKDTKPKKISLEEMFVLTITAKVETEKDIPA
LYLRSLENWSLQQAATGLKEMGRHSEAETFCTKVLKRHPDHTAVFLLLRQVQCEQRLLSH
QQLPDTFLEELKKAVMSNFSSVTAWHWLAEVYKSQGLMVAAEMCYRQGLQLSSQKGDMNG
KLSSLLRLALLALSLSKIKLQNNRWMSLVKEATSEAQKISFCPLAGLLQALLQFIVKMGA
RETRRLLERVVYQPGYTESIASVARWYLLRHLWAKNDDELIAVLLQNAKQKEDFRMEELH
KKLLASS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtcaaggccatattgaaaaatgcaagggaagctatccgaaataaa
gaatttaaagaggcactgaaacattgtaaggctgtgttgaaacaagacaagactaactat
aatgcctgggtttttattggagttgctgcagcagagttggaacagcctgaccaggcgaag
actgcatacaaaaaggctgcagaacttgatccagatcaattgctggcatggcaggggttg
ctaaacctgtgtgagaagaatgatacatctgacaataagcatgagttgttgggaatttac
caaaagctaatgaaattgtatgaaagttcagataaacagaaatggcatgatgtctgcctg
aagttagttgacctctatcatcaagaaaataagtatctagaggttgccaaaacatggagt
cgaatgatacagctaaaacaacaggatggagctgataaacaagagcttcatcatttgtgg
aggaagatgatccagttgcttgcagacaaagtagagagtcaggataatgagacccaacaa
ctgttgaaaactgcttttgaaaatgtcctttcatccatggacaagattccaagtgacaac
catcagaagctttccactgagtatattaaatttttatcaaaactatcacatgaagaagac
aagctaaaactagcttgtgaggctttgctatcccagtatccaaattcaacatctacacta
gaagtactcagcatgcattttatccagacagagtgctttagcgaagaagctttgcagtgt
tattcaagacttaataaaatggaaccaacaaatgggcttggtcttattggagttgggatc
aaagctatgcaagaaaagaaatatgacgaagcaacaaagaacctaactgaaggattaaag
caggcacgctcagcaattacagcatggttttatctggcaaagatacaactcctgatgcac
aagtacgaagaaacaattagctcctgcagacagggtctggagctgttggaaagcagtgtc
cgtgatggtaacactcagcaaaaacacaagttgcttcatttacaagcagaagcaatggtc
agatctggtgacccaaataatgcacagaaagtctttgggattttggaacagcttcctgac
tccaatgaaccaacactgcttgccatgaaaggccaagcttatttgagcaaaggtctgatg
aaaccagcatctcagattgcaacggatcttatggcttcttatcccgacctggctgagact
tggaaactccaaggccttattaattacacacaaaaaaattatgtgcaggcagaacaatgt
ttccataaagctgtgaaaataaaagcagactgtggagaatattactactaccttggacta
acctattggttcatgggggaggcgatgagaaaagacaaaactaaaactgctacacatttg
ttaaaggctgccaggttggacacatacaatggaagaattttctgctacttaggccactac
tatcaagacatagtacaagataaaagcagagctcgaggctgttacaaaaaagcctttgaa
ctgaacaatagtgatgaagaagcaggagcagctgctgttgatctcagtgttgaacttgga
gatatggagactgctcttggaattttaaggacagtgactgaccactcgagtgctgggaca
gccaagtgggcttggcttagacgaggactttattatctgagaaccaaccagcattcacag
gctgttgcagatttacaagcagctttgagagcagacctgaatgactcaaattgctgggaa
tgtttaggggagtcttatctcagtagaggaggttacaatgctgccttaaaggccttcaca
aaagccagtgaactgaatccaaagtccgtgtacaatatttacaagatagcagccatcaaa
cagattcttggcaagtacgcagaggcaaatacagagtataaacagatcattcaaaataca
aaaaactacgtccctgccctcaaaggcctaggtgagtgctacttaatgatgacacgaaat
gcacttgacgattgtttagatggaagagctttggattcaacagaagaggcacttcagtac
ttagctagagctgtactgtgtcgccctgatgtatcatgcctttggaagctaattggagac
acgtgtaccacactccatgctttgtcaccaacgaaagttaatgtcaaagtctctgctgtt
cttattggacagaatgaaaagagtagcatacagtctttaaacaaaaatgagctacttcgc
ctaggaggaaggtgctatgggcgcgctcttacattgatgtcaacatctgctaatctgtgg
tgtgaccttggcatgaactactatcgacaggcgcagcagcacctggttgccgcaggagaa
gtgaatatagtgcctgagtttatagaaaaggcacttcagtgccttaaaaaatctgtgatg
ttggacagcaaaaatcatctgtactggaatacgcttggagttattgccagttacaaaggt
tttgaaaattatgcccttgcacagcatgcatttatcaaatctgttcaggttgaacaaaat
aatgtagtggcctggaccaacttgggggcaacttatttgaagaacaaaagtattgagctt
gcccacgaagcctttaaggttgcccaatctttggaaccctcgtatgttagatgctggatt
ggacaggcacttattgccgaatctgttggcagctatgagacgatggatttgtttagacat
accactgagcttggtgttaatactgaaggagctaaaggttatgcacactgggtgtgtaca
acattgcaagataaatcaaacagaaattcagaactgtataagtacaatattgtacaaatg
aatgcaatagctgctgcacaagttgccatgagcaagtacacagagagaattcagactgat
gcaacagctttcacaatgttgggttacttaaatgagtatctaaacctcaaaaaacaagca
gcagaggcatatcacagagtagttgtgctattacagaatactgaagatgaagaaaaactt
aaatatgctcagagaaattggattcgagctttatgtactgcaggtcaatatcaagatgct
atccaggctcacatgttaaacccacttgtggagtttgatgacatcgttagtcttgctctg
gcttacatgaaggaagggcttcttcaggagagtgccaaagtttatgaaaaggctttaact
attgcccgcacagagaaagagaaggctcatataatgattgcacttgcaatgatcgctttc
aaggagggcagaatggacagtgctaaaactttactctttaaatgttccatgctgaaggag
cccagtatagaaagtctacaggctttgtgtgctctgggcctgtcgaagaaggataccact
cttgccacagcagcacttaatgaactgttcaaacatttggacaaaatcaattcaacctat
gaaacctgccttctttcttcagggatgttttatttgcaagctaacagtgtagctgtgcag
agacaggctgccaaagctattcattgcaatccagctgatcccgccctttggacattatta
tccagacttgttcctcaacatactccccaaatggcagaagctggggcagtagctggcaat
attgcacaaattctaagttctcatcagacaaagaatgcacttttgtgcagtgctgtaaat
cagttggcagcaggtaaacatgcagcagacaataacaaggataatgcattaaagactatt
caaaaggcagtccatttgtatccagatgatcctgcggtttgggctgttttaatggcagcc
tgtcacacggaaaaaacattatcacatttaaaggatacaaaaccgaagaaaatttcatta
gaggagatgtttgttttaacaatcacagcaaaagtagaaaccgagaaggacataccagca
ctctatcttcgatccctggagaactggtctctgcaacaggccgcaactggattaaaagaa
atgggcaggcactctgaagctgaaaccttctgtactaaagttctcaagaggcacccagac
cacacagcggtgttcctattattgagacaggttcaatgtgaacagcgtttgctttcgcac
cagcagcttccagatacttttctagaagagctgaagaaggctgtgatgtcgaacttctca
tcagtaacagcttggcattggctggcagaagtgtataaatctcagggtttgatggtggcc
gcagagatgtgctataggcaaggattgcaactatcctcgcagaaaggcgatatgaatggc
aagttgtcaagtctgctccgattagcactccttgcactctcactcagtaagattaaactt
caaaacaatcgatggatgtcactagtcaaagaagcaaccagtgaagctcaaaagatctct
ttttgtcctcttgctggtctacttcaagcactcctgcaatttatagttaaaatgggagca
cgagaaactcgacggctgctggagagagtagtatatcaaccaggttacacagagagcatt
gcatcagtggcacgttggtacctcctccgacatttgtgggccaaaaatgacgatgaactt
atcgcagttttgctgcaaaatgccaaacagaaagaggatttcagaatggaagagctgcac
aagaagcttctcgcatcatcctaa
DBGET
integrated database retrieval system
