Scyliorhinus canicula (smaller spotted catshark): 119970551
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Entry
119970551 CDS
T11175
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119970551 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119970551 (xrcc4)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119970551 (xrcc4)
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GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
Mur_ligase_M
XLF
Motif
Other DBs
NCBI-GeneID:
119970551
NCBI-ProteinID:
XP_038661290
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Position
8:complement(144098497..144679568)
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AA seq
382 aa
AA seq
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MNDKYNSCNGAHSVAHLSYVDTMQSACISQQRSAKETNTGVTMERQVFRIWPLSAPDIIY
YLQISWEKDQDLGSGFTVTICNGEQAWSGRVSDNQITLEAKEAEMDREKYVDELRQALTT
GEERVKNYSFDFFKDNDKEVFHFSYEKLLKDISFKLGSVELRKVLDSADVIKELINYVLH
CNAELRDRNEHLQQENKRLSCDRNYSLKELEKYIKAKEELEQDLYSRFILVLNEKKAKIR
SLQEKLKCVDEQVEFKSQSRTAVATSQETSVAEEDFDCSTDEENKGSENRTWSQPSRSAN
VPSQSDPIGSSLHDVIDIAPSRKRRQRYPQQNKMAETPKDSPEKRSCPVSSVSSIIHNQA
EEEQSLKTLPNTVEPDDLFDNI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaatacaacagttgcaatggggctcattcagttgcccatctttcttacgtg
gatacaatgcaaagtgcatgcatttcccagcagaggtcagcaaaagaaactaacacgggc
gtaacaatggaaaggcaggttttcagaatctggccactctctgcaccagacatcatctac
tatctgcagataagttgggagaaagaccaagacctaggaagtggttttactgtgactatc
tgcaatggagaacaggcttggagtggaagagtgtcagataatcaaataactctggaagca
aaagaggctgaaatggacagagaaaaatatgtggatgaacttcggcaagcattgacaacg
ggtgaagaaagagtgaaaaactacagctttgacttttttaaggataatgacaaagaagtt
ttccatttctcatatgaaaagcttttaaaagacatctcatttaagcttggctctgttgaa
ttgcgaaaagtcttggactcagcggatgtcattaaggaactcatcaactatgtgttacac
tgcaacgcagaactgcgagacagaaatgagcacttgcaacaagagaataagcgactatca
tgtgatcgtaattacagcttgaaagaattggaaaagtatataaaggctaaagaagagttg
gaacaggacctctattcacgtttcatcttagtgctaaatgaaaaaaaggccaagattcga
agtctgcaggaaaaattaaagtgcgtggatgagcaagtggaatttaagagccagagcagg
actgctgttgccactagccaggaaacgtcagtagctgaggaagattttgattgtagtact
gatgaagaaaacaaaggctctgaaaacagaacgtggtctcaaccatccaggtcagccaat
gttccatcccagagtgatcccattggcagcagcctacatgatgtgattgacatagcacca
agtcgaaagcgacggcagcgatatccacagcagaacaaaatggcagagaccccaaaggat
tctccagagaagagatcgtgcccagtgagctctgtatcatcaataatccataatcaagct
gaggaggaacaatcactgaaaaccttacccaacactgttgagccagatgacctctttgat
aatatttaa
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