Scyliorhinus canicula (smaller spotted catshark): 119970564
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Entry
119970564 CDS
T11175
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like isoform X1
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04144
Endocytosis
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119970564
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119970564
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119970564
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119970564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
FYVE
SARA
Motif
Other DBs
NCBI-GeneID:
119970564
NCBI-ProteinID:
XP_038661320
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All DBs
Position
8:complement(148574940..148700516)
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AA seq
1532 aa
AA seq
DB search
MDSYFKSAVCDLDKLLDEFEQNPDENDFCKTGVEEPISSDYPSLQSNSKYLTNLPASTAQ
ATFSTHSFDASDGRLKTDSLSPCIADPRETLTLSQSQKTLTELDLLSTVDSRASGDPEQF
NHNRGSGPICDLISDTESVTHETNGPEVDNEAEIEPTENRASGSLLIDFNQPSPPVHIGE
LECSGGESLGITSLLELNISFHNGTGLEPQHSGYFNAEIKNQEYPNQHKSPDELEDDKPQ
KEEEHLEKLPQSEQSEELSFVSKHTNEISSVIDDATGYHACTNKRLEHPANLPTSVNLNN
VTAVVSCEAEDVETGLEVEKEFLKVRYTCNAGLTKNANRMGQMNNLTKSSDSLLIPLPAA
GCAINSVDSEQDSQANSSQKESNGTLDYDLATCIIKDSVNLSSKQCDQGLPLVDGTNQNL
EHNGDISSMEPVYFEGEEKTEEKDEKYPNKWVQHERTLISSATLAETVAKPLEEVLNNVN
DMEAVSTYKEFTAEFSFVNDIDQDGYDINDMLVSDSELDAFLMEQSDPNGLTEPMVGHSV
QSFSEPTTSQTGLLETVGSRSLPKDVVADGISRGPWEEETPISAEHEKGKLTLNTESTPS
PTENGLVNPAVNDLLFGITQKPGRTKKNESLSATDPDQIVNSTLNNQINFGGARPKLLNS
QAGIQSNRDLNGPILDNPKDAADGLDQCTVYIESKGLVSETVQSPSILSSTCNYDISTED
GTQVFGPSYDSITHDYEEIASEGVDVTEQLTKEATVLGQNQPQWIPDSEAPNCAKCQARF
TFTKRRHHCRACGQVFCAACCNQKCKLQYLENKEARVCVVCYSSIQKAQAFKTMMSPTGP
SPNPNIPSEYCSTVPPLQQAQASGTLNSPPPTVMVPVSVLKHPRNESTGICSREHRRVWF
ADGILPNGEVADTAVIGSSTVGVGKRVPDEVCRMSPATQEPKMPSSFNAGDKIHSVDALR
TDSAITKTVLTSLQDVKSDITCRADYTALANVGKSVAKIISLIPDDEHGLPPIILAIGEQ
EVTLEEHPSQDQAMLLLKDDGPSPLTFVLNANLLVNVKLVNYAANKCWCFTSNGLHGVGQ
EEVVILLLCLPDEHTIPKDIFNFFITLYQDATKGKTVGNLGNITFTENFLGSKDHGGFLF
IVPTAQSLADVLLPSSPFLFGILIQKLEVPWAKVFPIRLMLRLGAEYNVYPCPLLSVRFR
KALFGETGHTIMNLLADLRNYQYTLPTIEGLVLLVEMGKSSIKIPKRRYNEIMKVVTSSN
EHVITMGTCFSLDADSHLVCIQNDDKNYQTQANTIAGKSREVTGASFVVFNGALKTTSGF
IAKSSIVEDGLMVQITPETMEGLRRALREKRDFQIICGKLDPDDRREFVNIQWVDGDEPG
NKGVISPVDGRSMEDIPSINILQENVFEMAGIVVKCTEVFYLQRNHDPLSPTVPAVQSEL
TEQIANACCAALCPHLKVLKEIGINKLSLRVSLETDKVEYQAGSRGQLLPQHYMNDLDSA
LIPVIHSGSSYASSGPLEMELFFFILESLVSG
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggacagctacttcaagtcagcagtttgtgacctggacaaattgcttgatgagtttgag
caaaatccagacgaaaatgatttttgcaagactggtgtagaagagcccatatcttcagac
tatccatctcttcaatcaaactcaaaatacttaacaaacttgcctgcatccactgcacag
gcgacattcagcacacactcatttgatgcatctgatggtcggctcaaaacagattcattg
tcgccatgcattgctgatccgagagaaactttaacattgtcacaatcccaaaaaactcta
acagaattagacttgttgtctactgttgatagcagagcatctggtgaccctgagcagttc
aatcataacagaggcagtggacctatctgtgacttaataagtgacactgaaagtgtgacc
catgaaacaaatggccctgaggttgataatgaagctgaaattgaacccactgagaatcgg
gctagtggctctctgctgatagactttaatcagccttctccaccagttcatattggagaa
ttggaatgttcaggaggagagagtctaggaattacaagtctattggagttgaatatatct
tttcataatggtacagggcttgagccacaacattcaggttattttaatgcagaaataaag
aaccaagaatatccaaaccagcacaagagtcctgatgaactcgaagacgataaacctcaa
aaggaagaggaacatcttgaaaaattgcctcagtctgaacaaagtgaagagttatcattt
gtttcaaaacacaccaatgaaatcagttctgtaattgacgatgctactggataccacgct
tgcaccaacaagcgactggaacatcctgccaatttgcctacaagtgtaaatttgaacaat
gtaaccgctgttgtatcctgtgaggcggaggatgttgaaactggtttggaggtcgaaaag
gaatttttaaaagtgagatatacatgtaatgcaggattaacaaaaaatgcaaataggatg
ggtcaaatgaataatctgaccaaatcttcagattctttgttgattccacttcctgcagca
ggctgtgccataaactcagttgattcagagcaggattcgcaagccaactcatctcaaaaa
gaatctaatgggacgttagactatgacttggccacgtgcattattaaagactctgttaac
ctgagctccaaacaatgtgatcaaggtctacctcttgtggatggcaccaatcagaatttg
gagcataatggtgatatctcttccatggaacctgtatattttgaaggtgaagagaagact
gaggaaaaggatgaaaaatatccaaacaagtgggtgcaacatgaaagaactttgatatct
tcagctactcttgcagaaactgtagctaaaccacttgaagaggtattgaataatgtaaat
gacatggaagcagtgtcgacttacaaagaatttacagcagagttttcttttgttaatgac
attgaccaagatggatatgatataaatgatatgctggttagtgattctgagcttgatgcg
ttcttaatggaacaaagtgatccgaatggtttaacagaacccatggtaggccattcagtt
caaagcttttcggagcctactactagccaaactggtttgcttgaaacagttggttctcga
agtcttcctaaagatgttgtggctgatggtataagtcgtggtccttgggaagaagagact
cccatatcagctgagcatgaaaaagggaagttaacgttaaatactgagagcactccatcc
ccaacagaaaatggtttagtcaaccctgctgtaaatgacctactgtttgggataactcaa
aaaccaggcagaaccaaaaagaatgagtcattgtctgccactgaccctgatcaaatagtc
aactctacccttaataatcaaattaattttggaggtgcaagacccaaacttcttaattct
caagcaggcattcaatcaaatagagacctgaatggtccaattcttgataatcctaaggat
gctgctgatggtttggatcagtgcacagtgtatattgaatcaaaaggtcttgtttctgaa
acagtccaaagcccatccattttaagctccacttgtaattatgacatttctacagaagat
gggacacaagtgtttggaccatcctatgattcgattacacatgattatgaagaaattgca
tctgaaggtgttgatgtcactgaacagctcaccaaagaagcgactgtactgggacagaat
cagccacaatggataccagattctgaagcaccaaactgtgcaaaatgtcaagctaggttc
actttcacaaaaaggcgacatcactgcagagcatgtggacaagttttctgtgctgcctgt
tgtaatcaaaagtgtaagctgcagtatttggaaaacaaggaagctcgagtttgtgttgtc
tgctatagcagcatacagaaagctcaagcatttaagacaatgatgagtccaactggtcca
agccctaaccctaatatcccatcagaatattgttccacagttccacctctgcagcaagct
caggcatctggcaccctcaactcccctccccccactgtcatggtaccagtctcggtacta
aaacacccaagaaacgaaagcacaggcatctgttccagagagcacagaagggtatggttt
gcagatggcattctgccaaatggagaagtggcagacacagcagtgataggaagttcaaca
gttggagtaggcaaaagagtaccagatgaagtgtgccgaatgagtcctgccacacaagaa
ccaaaaatgccttcgtcttttaacgcaggggataaaatccattctgttgatgctttaagg
actgattcagctataacaaagacagttttaacaagtcttcaagatgtcaagtctgacatt
acttgtcgagcagactatacagcactggctaatgttggcaagtctgtcgcaaaaatcatc
agccttattccagatgatgagcatggtctacctcccattattctagcaattggagaacaa
gaagtaacattggaggaacacccatctcaggatcaggccatgttgttgctgaaggatgat
gggccgagtccattgacctttgtgttaaatgccaatctccttgtaaatgtgaaacttgtg
aactatgctgcaaataaatgctggtgctttacatccaatggattacatggtgtgggccag
gaagaagttgtcattctcttattgtgtttgcctgatgaacatacaattcccaaagacatc
tttaatttttttattacactttaccaggatgcaactaaaggaaaaaccgttggaaattta
ggaaatataactttcactgaaaattttctgggcagtaaagatcatggtggattcctcttc
atcgtacccactgcccagtcattggcagatgtactacttccaagtagcccatttttattt
gggatcctcattcagaaactagaagtaccttgggcaaaggtgtttccgattcggctcatg
ctaaggttgggcgcagaatataatgtttatccttgtccattattaagcgttcgattccgt
aaagcactttttggagaaacgggtcataccatcatgaatttgctagcagatcttcgaaat
tatcagtacactctacccacaattgagggattagtactacttgtggagatggggaaaagc
tctattaaaataccgaagagaagatacaatgagatcatgaaggtagtaacctcttctaat
gaacatgtgattaccatggggacatgttttagtttggatgctgactcgcacctggtctgc
atacagaatgatgataaaaattaccaaacgcaggcaaacactattgctgggaagtccagg
gaagttacaggagcctcttttgtggtatttaatggagctctgaaaactacctctggcttt
atcgctaaatccagtatcgtggaagatggacttatggtacagattaccccagagacaatg
gagggtttaagacgagctctaagggaaaagagagactttcaaattatttgtggaaagttg
gatccagatgacagaagagaatttgtaaatattcagtgggtggatggtgacgaacctgga
aacaaaggtgttataagtcctgttgatgggcggtccatggaagacattcccagcatcaac
atcctgcaggaaaatgtgtttgaaatggctggcattgttgtaaagtgtacagaggtattc
tatttgcaaagaaatcatgatcctcttagtcctactgttccagctgtacagagtgaactg
actgagcagattgccaatgcatgctgtgctgcattgtgccctcacctaaaggtcttgaaa
gaaattggaataaataagctgagcctcagggtctctttagaaactgacaaggttgaatat
caagcaggatcaaggggccaactacttccacaacactacatgaatgacctggatagtgca
ttaatcccagtaatccacagtgggagttcttatgctagcagtggtcctctagagatggaa
ttattcttcttcattttggaaagccttgtctcaggatga
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