Scyliorhinus canicula (smaller spotted catshark): 119970609
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Entry
119970609 CDS
T11175
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119970609 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119970609 (sv2ca)
Transporters [BR:
scau02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
119970609 (sv2ca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
119970609
NCBI-ProteinID:
XP_038661448
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Position
8:155535428..155850568
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AA seq
724 aa
AA seq
DB search
MDDAYRDRTTLMRGAKDIAKEVKKQTVKKASRGADHTQDEHNMTSYANFQDDDGYNYHGG
TYGAEPQEDEGSSDATEGHDEEDEIYEGEYQGIPDVGQRKANQVAIGQPVSDEYKDREEL
DAERRADEEELAQQYELIIQECGHGRFQWALFFVLGLSLMADGVEVFVVGFVLPSAETDM
CVENSRTGWLGSIVYLGMMLGAFFWGGLADKIGRRQALIICMSVNGFFAFLSSFVQGYGL
FLFCRFFAGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPH
YGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKQI
HDTNMRARGQPEKVFTVNRIKTPKLIDELIEIQTDTGTWYMRWLVRIKTELHGIWMTFMR
CFDYPVKKNTIMLITVWVTLSFGYYGLSVWFPDVIKHLQADEYASRVKRFYGERVEDFVF
NFTLENQIHTNGEYIRDRFTIMKFKAVTFEDSLFKNCYFEDVTSLTTYFRNCTFIETLFY
NTDLEASKFIDCQFDNTTFLHNKKGCQINFDEDYSAYWIYFVNFLGTLAVLPGNIVSALL
MDRIGRLTMLGGSMVLSGISCFFLWFGTSEAMMIGMLCLYNGLTISAWNSLDVITVELLP
TDRRATGFGFLNALCKAATVLGNLIFGSLVGITKAIPILLASTVLVCGGLMGLRLPDTRN
QVLM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcttacagggacaggactaccctgatgaggggtgccaaagacattgccaaa
gaagttaagaagcaaaccgttaagaaagcaagcagaggagcagaccacacacaggatgaa
cacaacatgacttcttatgctaattttcaagatgatgatggctacaactaccacggaggg
acttatggagcggaacctcaagaagatgaaggttcaagtgatgctactgaaggccatgat
gaggaggacgagatttatgaaggggagtatcaggggatcccagatgtgggtcaaaggaag
gcgaaccaggtcgctataggacaacctgtctcagatgaatacaaggaccgtgaggagctg
gatgctgagaggagggctgatgaggaggagctggcacaacagtacgagctgatcattcag
gagtgtgggcatggccgcttccagtgggcactgttctttgtgctgggattgtctctgatg
gctgacggagtggaggtgtttgtggtgggcttcgtcctgccaagtgcagagacagatatg
tgtgtagaaaactccaggacaggatggctgggaagcatagtgtaccttgggatgatgttg
ggggcctttttctggggtggtctagcagacaagatcggccggcggcaagccctcatcata
tgcatgtccgtcaatggattctttgcctttctttcatccttcgtccagggttacgggctc
ttcctcttctgccgattctttgccggatttgggattggaggagcagttccaattgtgttt
tcttactttgctgaagtcttggcccgggagaaacgtggtgagcacctgagctggctctgc
atgttctggatgatcgggggaatctatgcgtccgccatggcttgggccatcatcccgcat
tatggttggagtttcagtatgggttctgcataccagttccacagctggcgagtgttcgtc
attgtctgtgctcttccctgtgtctcctcagttgttgcactcacgttcatgcctgagagt
cccagattcctgctggaggtggggaaacatgatgaagcctggatgattctgaagcaaatc
cacgacaccaatatgagagcacgaggacagcccgagaaagtgttcactgtcaatagaatc
aagactcccaaactgatcgatgaactgatagagatacagacagacacgggaacttggtat
atgagatggcttgttcgaatcaagactgaattgcatggcatttggatgacattcatgcga
tgcttcgactatcctgtcaagaaaaacaccattatgctaattacagtttgggtaacactg
tcgtttggttactatggtctctctgtctggttccctgatgtcatcaaacaccttcaagct
gatgaatatgcatcccgagtgaaaaggttttatggcgaaagagttgaggattttgtgttc
aactttacactggaaaaccagatccacacaaatggagaatacatcagggacaggtttaca
atcatgaagtttaaagcagtaacctttgaagactccctttttaagaactgctattttgaa
gacgtcacatcattaactacttattttaggaactgcacatttattgaaactcttttctat
aacacagatcttgaagcgtctaaattcattgattgccagttcgacaatactacatttctt
cacaataagaaaggctgccagattaactttgatgaggactacagtgcctactggatctat
tttgtcaacttcctaggaacactagcagtgttgccgggcaacattgtatctgcactcctc
atggacaggattgggcgcttgacaatgttaggtggatccatggttctgtctgggatcagc
tgctttttcctatggttcgggaccagtgaagccatgatgattggaatgctttgcttgtac
aatggtctgactatttcagcctggaattccctcgacgtgatcactgtggaacttctgcca
accgacaggagagcgaccggattcggattcttgaatgccctgtgtaaagcagcaaccgta
ctcggaaatctcatttttggttctttggttggtataaccaaagcaatcccaatcctactg
gcatccaccgtccttgtttgtggaggcctcatgggactgcggctccctgatacaagaaac
caggtgctcatgtga
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