Scyliorhinus canicula (smaller spotted catshark): 119970627
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Entry
119970627 CDS
T11175
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119970627 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119970627 (ap3b1a)
Membrane trafficking [BR:
scau04131
]
Endosome - Lysosome transport
Others
AP-3 complex
119970627 (ap3b1a)
Endosome - Golgi transport
119970627 (ap3b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
HEAT_GCN1
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
119970627
NCBI-ProteinID:
XP_038661475
LinkDB
All DBs
Position
8:complement(158754294..159112687)
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AA seq
1072 aa
AA seq
DB search
MASNSLSYNDQGDRALGSESTELGQEATAMTSGGGFRLFSADYKKNEDLHQMLESNKDSL
KLEAMKRIVGMIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLALLSIS
TFQRALKDPNQLIRASALRVLSSIRVSIIVPIMMLSIKEAASDLSPYVRKTAAHAIQKLY
SLDAEQKEPLVEIIEKLLKDKSTLVAGSVVMSFEEVCPERIDLIHKNYRKLCNLLVDVEE
WGQVVIINMLTRYARTQFLSPWKEEELLDGNNEKTFYDSDEDQNKNGVAAKQPYVMDPDH
RLLLRNTKPLLQSRNAAVVMGVAQLYWHVAPKSEVNIVAKSLVRLLRSHREVQYIVLQNI
ATMTIQRKGMFGPYLKSFYVRSTDPTQIKILKLEILTNLASETNISIVLREFQTYVKSQD
KQFAAAAIQAIGRCATNISEVTDTCLNGLVYLLSNRDENVVAESVVVIKKLLQTQPSQHS
EIIKHMAKLLSNITVSMARASILWLIGEYCERVPKIAPDVLRKVAKNFTNEEEIVKLQIL
NLGAKLYLTNPKQTKLLMQYILNVAKYDQNYDIRDRTRFIKQLIVPNEKSGALSKYAKKI
FLVQKPAPILESPFKDRDRFQLSTLSHTLNTKASGYLELPDWPQTAPDPSVRNVEVIQPV
EEQLMPVGKLKGKKDNLGGKFYSDSEEKEESSKSSESSSESDSKNEDSSSSSSEESSDSE
SEKEKKDSENSDSENNQAKTKSKKLDSASSSESEESSSEDSSESESNSEPDSTVKQKKEG
KSAVSVAKAAVKQEVSLLDLLDFSDVSTPVALPKPVMASRLATDLEGLSLSSTAVIDVTT
PVFVPAKSYSLLHRMSGKGLGAEYHFPRQPCIYNTQMVSVQITLTNSSEKEIRNIQIGER
KLASGMQMHDFYEIECLEPGASKTVSMGIDFCDSTQAANFQLCTFNDHFSVSVQPPVGEL
LLPVTTSEKDFRKEQGKLTGMNENSTAITGSPQNSSCQAIVHKVVNMANVGVVPSGQDNI
HRFAAKTVNSGALVLITIEVKEGSTMQLSINTEKSVIGSVLLRELKSVLSQE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaacagcttgtcctacaatgatcagggtgaccgggccctgggaagtgaatcc
accgagttgggccaagaagccacggctatgacttcaggcggaggcttccggctcttcagc
gcagactataagaagaatgaagatcttcatcaaatgctggagagcaacaaggattcactt
aaattggaggctatgaagagaattgttgggatgattgctaaaggaaaaaatgcttcagag
ttatttcctgctgtcgtgaagaatgtggccagcaaaaacattgagttgaagaaattggtg
tatgtttaccttgtacgttatgcagaagagcagcaagatttggccttgttatcaattagt
acattccagcgtgcactgaaggatcctaatcagttgattcgggcaagtgctttacgagtt
ctgtccagtattagagtatcaatcattgttccaataatgatgctgtctattaaggaagct
gccagtgatctgtctccgtatgtccggaaaactgctgcacatgccattcagaaactttac
agtctagatgcagagcagaaagaaccattagtagagatcatagaaaaactactgaaagat
aaaagtacgctggtagctggaagtgttgtaatgtcatttgaagaggtctgccctgagcga
attgacttgattcacaagaattaccgcaagctgtgtaacctgttggtagacgtggaggag
tggggacaggtcgttataatcaacatgctcactcgctatgcacgaacacagtttctaagt
ccgtggaaagaggaggagttgctggatggaaacaatgagaaaacattctatgattctgat
gaagaccagaacaaaaatggtgttgctgctaaacagccatatgtaatggacccagatcat
cggctgctcctccggaataccaagcctttactgcagagcaggaatgctgctgtggtaatg
ggggttgctcaactttactggcacgttgcgccaaagtcagaggtcaacattgttgctaaa
tcattggttcgattgcttcgaagccacagggaagtgcaatacattgttttgcagaacatt
gccacaatgaccatacaaagaaaggggatgtttggaccatacttgaaaagtttttacgtt
cgatcaactgatccaacacagataaaaattttgaagcttgagattctgacaaacctggca
agcgaaaccaacatatctatagtgctacgcgagtttcagacctatgtgaaaagtcaggac
aagcaatttgctgcagccgcaattcaggcaattggaagatgtgccaccaatatttccgaa
gttacagatacgtgtcttaatgggttggtgtatctactgtccaacagagatgaaaatgtt
gttgcagaaagtgtagttgtcattaagaagctactccagacacaaccatcacagcacagt
gaaattatcaaacatatggccaagctcctaagcaatattacagtatccatggctcgagca
agcatcctttggctgataggcgaatactgtgaacgcgtaccaaagattgcaccagatgtt
ctgaggaaagtggcaaagaattttacaaatgaagaggagatagtgaaactacaaattctt
aatcttggagctaaactctacttaacaaatcccaagcagacaaaattgcttatgcagtac
atattaaatgtagccaagtatgatcagaactacgacattagagatcgtacaagatttatc
aagcagctgatagttccaaatgagaagagtggagctttaagcaagtatgctaagaaaata
ttccttgttcaaaagccagcaccaatcctcgaatctccatttaaagatagggatcgtttc
caactgagcacattatcgcacacgcttaataccaaagcaagtgggtatctagagcttcca
gactggccgcaaacagcccctgacccttccgtgcgaaatgtggaagtcattcagccagtt
gaagaacagctgatgccagtaggtaaactaaaaggaaagaaagacaatttggggggcaag
ttttactctgattctgaggagaaggaagaatccagcaaaagtagtgaatctagtagtgaa
agtgacagcaagaatgaagacagtagttcgagttcaagtgaagagtcaagtgacagtgaa
tctgaaaaagagaaaaaagacagtgaaaatagtgactccgaaaataaccaggccaaaacc
aaatccaaaaagctggattctgcatcttcctccgagtcagaggaaagttcatctgaagat
agttcggaatctgagagtaactccgaaccagatagcacagtgaagcaaaagaaagaaggg
aaaagcgcagtatcagtagccaaggctgctgtcaagcaggaagtttcgctcctggatttg
cttgatttttctgatgtgtcaacaccagtagccctccctaaaccagtaatggcttcaaga
ttagcaactgatttggaaggattatcactttccagtaccgctgtcattgatgtgaccact
ccagtatttgttcctgcaaaatcatactcactacttcaccggatgtctggaaaaggtctt
ggggcggagtatcactttccacgtcaaccatgtatttacaacacacaaatggtgtctgtt
cagatcacattaaccaacagctctgagaaagaaatccggaatatccaaataggagaacgg
aaacttgcatccgggatgcaaatgcatgatttctatgaaatagagtgccttgagcctgga
gcatcaaagacagtctcaatgggcattgacttctgtgattccacacaggctgctaacttt
cagctgtgcacattcaatgatcatttcagtgtcagtgtccaacctcccgtgggagagctg
cttctgccagtcaccacatctgaaaaggatttcaggaaagaacaaggaaaattgacagga
atgaatgaaaattctacagcaatcacaggttctccacagaattcctcctgccaggcgatt
gtgcataaggtggtaaacatggctaatgttggggttgtaccttctggccaagataatatt
cacaggttcgcagcaaaaactgtgaacagtggagctttggtactaatcacaatagaagtg
aaggaaggatcaacaatgcaactcagtataaacacggaaaagtctgtgattggttcagtg
cttctgcgggagctaaagtctgtgctttctcaagagtga
DBGET
integrated database retrieval system
