Scyliorhinus canicula (smaller spotted catshark): 119970642
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Entry
119970642 CDS
T11175
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03022
Basal transcription factors
scau03420
Nucleotide excision repair
scau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119970642 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
119970642 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119970642 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scau01001
]
119970642 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119970642 (cdk7)
03019 Messenger RNA biogenesis [BR:
scau03019
]
119970642 (cdk7)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119970642 (cdk7)
Enzymes [BR:
scau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
119970642 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
119970642 (cdk7)
Protein kinases [BR:
scau01001
]
Serine/threonine kinases: CMGC group
CDK family
119970642 (cdk7)
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119970642 (cdk7)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
119970642 (cdk7)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119970642 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
119970642
NCBI-ProteinID:
XP_038661509
LinkDB
All DBs
Position
8:complement(161367589..161437535)
Genome browser
AA seq
391 aa
AA seq
DB search
MAMDVRSRAKRYEKLDFLGEGQFATVYKAKDKNTDNIVAIKKIKVGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGYKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYTLM
TLQGLEYLHLHWILHRDMKPNNLLVDENGILKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARIYGVGVDMWAVGCILAELLLRTPFLPGDSDLDQLTKIFEALGTPTEEQWPGM
TSLPDYISFKSFPGTPLEHIFSAAGDDLLELLQDLFTFNPCARVTATQALKKRYFSNRPG
PTAGPQLPRPNCATEVLKEQEAKTGFKRKRNENTEQAIVHGTWNCRGFKDVLKPLRTEKH
SCHCSRWIFVTKFKCPEPIIQGNDKKMRIFF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatgttcgttccagggccaagcgctacgagaagctcgactttctgggagag
ggacagtttgccaccgtctataaggcaaaagacaagaacacagacaacattgtcgcaata
aaaaagattaaggtgggtcacagatcagaagcgaaagatggcattaatagaacagctctt
cgagaaatcaagctgctacaggaactcagccacccaaatattataggacttcttgatgct
tttggctacaagtccaacatcagtcttgtgttcgactttatggagaccgatttagaggta
ataataaaagataccagtcttgtgctgactcctgccaacataaaagcatacacgttaatg
acactccagggtctcgaatatcttcatttacactggattctacatagggatatgaagccc
aacaatttattagtggatgagaatggaatccttaaacttgctgattttggtttggccaag
tcatttggaagtcccaatagagtttacacacatcaggtagtaacaagatggtacaggtca
ccagagcttttatttggagccaggatatatggagttggagtagacatgtgggcagtcggt
tgtatattagctgagctactacttcggacaccatttttacctggcgattcagatctagat
cagctgacaaaaatatttgaagctttgggtactccaacagaagaacagtggcctggaatg
accagtcttccagactatatatcatttaaaagtttcccaggaactccacttgagcatata
ttcagtgctgctggggatgacctactggaattactgcaagacctgtttacatttaatccc
tgtgcaagagtaacagctacccaggcactgaaaaagaggtattttagcaaccgccctgga
ccaacagcagggcctcaactgccccgacccaactgcgcaactgaagtcttaaaagagcaa
gaggctaagacaggtttcaagcgtaaacgaaatgaaaacacggagcaagctatagtacac
ggcacttggaattgtagagggttcaaagatgtgctgaaacccctccggactgagaaacat
tcttgccactgcagcagatggatttttgtgacaaagttcaaatgtccagaaccaataatt
caaggaaatgacaaaaaaatgaggattttcttttag
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