Scyliorhinus canicula (smaller spotted catshark): 119970656
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Entry
119970656 CDS
T11175
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119970656 (erbin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
LRR_5
LRR_NXF1-5
PDZ_6
PDZ_2
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
119970656
NCBI-ProteinID:
XP_038661558
LinkDB
All DBs
Position
8:complement(164083854..164412420)
Genome browser
AA seq
1488 aa
AA seq
DB search
MTTKRNLFGRLVPCRCLRGEEEAVTVLDYSHCSLEQVPKDIFISDKTLEELYLDANQIEE
LPKQLFNCQSLHKLSMPDNDLTVLPASIANLINLRELDVSKNGIQEFPENIKNCKVLSVV
EASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM
NKLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLAMLPGFIGKLKQLTYLDVSKN
NVEMVDDAISGCENLQDLLLSSNVLQQLPESIGSLKKLTALKVDENQLINLPDSVGGLSC
LEEFDCSFNEIEALPPAIGQLQNQRTFAADHNFITELPSEVGNWKNVTVLFLHSNKLEYL
PEEMGEMQKLKVINLSDNRLKNLPFSFTKLQELTAMWLSENQSKPLIPLQKEVDPDTQKQ
VLTNYMFPQQPRTEDVLFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTAQSVVHRLKDDGASDDSGTEMKQNDDRSVTTKNSGVEVTECTI
EYIKSSENGALTMVQNCTKQNLGQGLSGNYHVETTQTNAVVDDAEDVSTAANDEELLEDT
ENTSSDEEMKMAELRPPLIAIPITQPKVVALSKEKRDDADSLFEEIIPNSNQNNSNCSSP
SRISDTVSFNTGSSQETLQSTPDKDAKTAIPFLKRNNRGGLRETSPLLQNGTRSSTPVQS
IVKTHEIDSIIDSPTGNKEAIKLSEFEFNVEEKLALLEREIDLNSNTQQYQKLLQIGVNK
NELVSEDAFQRLDAVTKCKTNFDGGMRIFEQSSETILKGSAKEIPEHLKNGNEIPNDWPP
YQINGPPEEIKQYQFHTEAGQQNSPAPFSSVDAAISRSNEELSPHRECSQGPVVKSHSIT
HIETGGLKLYDINDNGPHEQSLMVRAPPISGQGQNIIRSKSASLLSDQSLQPFTGNSASS
SDLVSCKKAVYTFDQNFNPQGISLKRGAIAVAQMPSVPQYNVQYSSSGITKENVWPQRQA
FQTEADIIGSHHLQRSETLDNANYVKHSANMNFSNRNNSQSNMSYNMQPRIGPRPVEMWG
CPPGERLIQTSQRSTLQRQSSVSSTSSVTLPEAHHCRRVPVSEADYMTYRDLHTLGRGPQ
VVQGSQRPLSARTYSVDGPTASRPHSARPHVTEVPERTMSISDFNYSRTSPTKRPNVRVK
SEHSLLDAQGTNKVPPDWREQVLRHIEAKKLEKSMLSRSFNFNYAAFSSMHSGSCRELHD
SQGNVALSFADRRNSGVHMFRYPSQGNSIGDPSQDDVFAVGQQNYSSGTLVMKDIPPDSM
RKVPLTNGQMYQSSRVPINCNQPHHTMSQATVGRHPSREQLIDYLMLKVSHQPPYSPTQG
ASTSHLMRQGRDIVQHEMHVRIDKNPELGFSISGGIGGRGNPFRPDDNGIFVTRVQPEGP
ASKLLQPGDKIVQANGCTFVNIEHGQAVSLLKTFQNTVDLIILREVAS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaagcgtaatttgtttggaaggctggtgccatgtcgctgtctaaggggggaa
gaagaagctgtcactgtgttggactattctcactgcagtttggaacaggtgcccaaagac
attttcatttccgataagaccttggaggaactttatttagatgctaaccagattgaagag
cttccaaagcaactgttcaattgccagtctctacacaagctgagcatgccggataatgat
ctaactgtgttgccagcatccattgcaaatctcatcaatctcagggaattggatgtcagc
aagaacgggattcaagaatttccagaaaatatcaaaaactgcaaggtcctatctgttgtt
gaggccagtgtaaaccctatttcaaagcttcctgatggcttcacacagttgctgaacctg
actcaactttacctaaatgatgcctttttggagtttttgccagcaaactttggaagatta
accaaattgcaaatattggaactgcgtgaaaatcaactgaagatgttgccaaaaaccatg
aacaaacttacccagttggagagattagatttgggaagtaatgagttcacagaagtgcct
gaagtattagaacaactgagtggactaaaagagttttggatggatggcaatagacttgca
atgctcccagggtttattggcaaattaaagcagttgacctacttggatgtttccaaaaac
aatgtggaaatggttgatgatgccatatcaggttgtgagaacctccaggacctgttgcta
tccagcaatgtgctccaacaactacctgaatcaattggttctcttaagaagttaactgcg
ctcaaagtggatgaaaaccaactgataaacctgccagattcagtaggagggctttcatgt
ttagaagaatttgattgcagtttcaatgaaattgaagctctgccgcctgcaattgggcag
ctacaaaatcaaagaacgtttgccgcagatcataacttcataacagagcttccttcagag
gttggtaattggaagaatgtgactgtactgttccttcattccaataaattggagtacttg
cctgaagaaatgggagaaatgcagaaactgaaagtcattaatctcagcgacaaccgatta
aagaatctgccgtttagtttcacaaaactgcaagagctaacagcgatgtggctgtctgaa
aaccagtccaaaccacttattcctcttcagaaagaggtggatccagatacccagaagcaa
gtgcttacaaactacatgttccctcagcaacctcggacagaagacgtgttgtttatctcg
gataatgaaagtttcaatccttcactgtgggaggaacaaaggaagcagcgtgctcaagtg
gcttttgaatgtgatgaggacaaggatgaaagagaggcaccaccaagggaaggtaacttg
aaaagatacccaacgccatatcctgatgaactcaaaaacatggttaaaacagcacagagt
gtggtgcatagattaaaggatgatggggcatcagatgattctggaactgaaatgaagcaa
aatgatgacagatcagtcacaacaaaaaattctggtgtagaggtaacagaatgtactata
gaatacatcaaatcatcagaaaatggtgcattgacgatggtgcaaaactgcacaaagcaa
aatctggggcaaggtctaagtggaaactaccatgtggaaactacccaaacaaatgcagtt
gtggatgatgctgaggatgtaagcacagctgccaacgatgaagaactgcttgaggatacc
gaaaacacttcttcagacgaggagatgaagatggcagaattgaggccacctttgattgcg
ataccaatcactcaaccaaaagttgttgcactgagtaaagagaaaagagatgatgcagat
tccttatttgaggagataattccaaacagtaatcagaacaacagtaattgttcgtcacca
tccagaatatcggatacggtttccttcaacacgggaagtagccaggagaccttgcagtca
acccccgataaagatgctaaaactgcaatcccatttcttaaaagaaacaatcgaggtggc
cttcgtgaaacatctccactgctacaaaatggaacaagatctagcacaccagttcaaagc
attgtgaaaactcatgagattgattcaatcattgattctcccacagggaataaagaagcc
attaaattgtctgaatttgaattcaatgttgaggagaaactagctctcctggaaagagag
attgatctgaatagcaatacacaacagtaccagaaattactccagattggtgtgaataaa
aatgaacttgtttcagaggatgcgtttcagagattagatgctgtaactaaatgtaaaact
aattttgatggaggaatgaggatctttgaacaatcatcagaaaccattttgaaaggtagt
gcaaaagaaatacccgagcatttaaagaatgggaatgaaatacctaatgactggcctcct
tatcaaataaatggaccgccagaggaaattaagcaatatcaattccacactgaagcagga
caacaaaattcacctgctccattttcaagtgttgatgctgctatctctagaagcaatgaa
gagctgtctccacatcgggagtgttctcaagggccggttgtcaaatctcacagtataaca
cacattgaaactggggggttaaaactttatgatatcaatgacaatggaccacatgagcaa
agtttaatggtaagagctccacctatatctggacagggacaaaatataatccgtagcaag
tctgccagtctgctgagtgaccagtcattacagccatttacaggaaattctgcatcatca
tcagaccttgtatcatgcaaaaaggcagtgtacacatttgatcaaaacttcaaccctcaa
ggtatcagtttaaagagaggagctatagctgtcgcacagatgccttcagtgcctcagtac
aatgtccaatacagcagtagtggaataaccaaagagaatgtgtggccacagaggcaggca
tttcaaaccgaagcagacatcataggatcccatcaccttcagaggtcagagacacttgac
aatgccaattatgtaaagcattctgcaaacatgaacttctctaatcgtaataattcccag
tccaacatgtcttacaacatgcaaccaaggattgggcctcgaccggtggaaatgtgggga
tgccctccaggtgagagactgattcagaccagtcagaggtccaccttgcagagacaaagc
agtgtgtcatccacttcctctgttactcttcctgaagcccatcactgtaggcgagttcca
gtatctgaggcagattatatgacttacagagatttgcatacacttggaagaggaccccag
gtagttcagggctcacaaagacctctatctgcaaggacttatagtgttgatggtccaact
gcatctaggcctcatagtgcacggccacatgtaactgaagttccagagagaacaatgtct
atcagtgactttaattactcacggactagtccgactaaaaggcctaatgtgagggtgaaa
tcagagcattcacttctagatgcgcaggggaccaacaaggtgccgcctgactggagggag
caggtgttgcgtcacatcgaagccaaaaagttagaaaagagcatgctgtctagatcgttt
aatttcaattatgctgcttttagcagcatgcactctggaagctgtagggaactgcacgac
agccagggcaacgttgccttgagttttgcagacagaaggaattccggagtgcacatgttc
cgttatccatcacaaggtaacagtatcggggacccaagtcaagatgatgtcttcgctgtt
ggtcagcagaattactcatctggcacgcttgtgatgaaggatattccgccagatagcatg
agaaaagtgcctttgacaaatggccagatgtaccaatcttcaagagttccgataaactgc
aaccagccacatcacacaatgtctcaagcaactgttgggagacatccttctagggagcag
ctgattgattatttaatgctaaaagtatcgcaccaaccaccatacagtccaacacaaggc
gcatcaaccagccatctgatgagacaaggccgtgatattgtacagcatgagatgcatgtt
agaatagataagaatcctgagctgggcttcagtatatctggaggtattggaggtcgaggg
aaccccttcagacctgatgataatggcatatttgtaactagagttcaaccagaagggcca
gcttcgaaactgctgcagcctggagataaaatagttcaggctaatggatgcactttcgtt
aatattgagcatggacaagcagtgtcgctattaaaaaccttccagaatacagtggactta
attatcctgagggaagttgcatcctaa
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integrated database retrieval system
