Scyliorhinus canicula (smaller spotted catshark): 119970670
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Entry
119970670 CDS
T11175
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
119970670 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119970670 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scau03310
]
119970670 (esr1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
119970670 (esr1)
Nuclear receptors [BR:
scau03310
]
3. Estrogen like
3A. Estrogen receptor
119970670 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
119970670
NCBI-ProteinID:
XP_038661590
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Position
1:193735795..194183368
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AA seq
590 aa
AA seq
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MLVMAIPLHHKSPAIALLQKIQASDLDTFGRQTLQLPISGDGPLNEIYVEKNRAGAMNYP
EGGYEFAAAATLYNTASLGYAASSDSHGSGNIGGLHSLNSMSPSPLVFLQTAPQLSSFVA
HGQQVPYYMDNEQSSCSSFGLREAPPSTFYRINSDSRRQRVNDHLSSTSEQSSPSAGTLE
SSKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSC
QACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRRKDEKDHIIKSTGVTSRPTSSSVSPAQR
NVKQNSLMGMTSDEILSTLMEAEPPMVYSEHDPSKPFTEASMMTLLTNLADKELVHMIIW
AKKVPGFVDLTLHDQVQLLECCWLEILMIGLVWRSMEHPGKLIFAPDLVLDRNEGKCVEG
MVEIFDMLLATVSRFRLLKLQCEEYICLKAIILLNSGVFPFLSSTMEALNDSEQIQIILD
KITDALVHFITRAGLSLQQQSRRLAQLLLLLSHIRHMSNKGMEHLYSMKCKNVVPLYDLL
LEMLDAHRMHTPMDKTPPGGNGTSPMNRGTTPSSSSLSLKKSDVSFETSR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatggcaattccactccatcacaaatcacctgcaattgctttgctgcagaag
attcaggctagcgatttggacacttttggcaggcaaactctacagttacctataagtggc
gacggacctctgaatgaaatctatgtggaaaaaaatcgagcaggagcaatgaactaccca
gaagggggctacgagtttgccgctgcagctaccttgtacaacacagccagtcttggctac
gcagcctcctctgactcacatggctccggcaacattggtggtcttcactccctcaacagc
atgtcgccgagcccactggtctttttacagaccgcgccccagctctcttccttcgttgcc
catggacaacaggtcccctactacatggataatgagcagagcagctgcagcagttttgga
ctgcgagaggcccccccttccactttttacagaattaacagcgacagtcgacgccaaaga
gttaatgatcatctctccagcacgagtgagcaaagcagcccgtccgcaggcacgttagaa
tcgagcaaggagacacggtactgcgcggtgtgcagtgattacgcctcaggctatcactat
ggagtctggtcgtgcgaaggctgcaaagcctttttcaagagaagcattcaaggacacaat
gactacatgtgccccgccacaaaccaatgcactatcgacaaaaacaggaggaagagctgt
caagcctgcagactgcgtaaatgctatgaagtgggcatgatgaaaggtggtatccgcaag
gaccgtagaggcgggaggatgctgaagcacaagcggaggaaagatgagaaggaccacatc
atcaaaagtaccggggtcaccagcaggccaacctccagcagcgtaagcccggcacagagg
aatgttaagcagaactcactgatgggcatgacatcggacgagattctcagcaccctgatg
gaggccgagcctcccatggtttactctgaacatgaccccagcaagcccttcactgaggcg
tccatgatgactttgctaacaaacctggctgataaggagctggtgcacatgatcatttgg
gctaagaaggttccaggatttgtggatttaacacttcatgaccaagtgcaactactggaa
tgctgctggttagaaattttgatgattggccttgtgtggcgctccatggaacatccaggg
aagctcatatttgcaccagatctggttttggacaggaatgaagggaaatgtgttgaaggg
atggtggaaatatttgatatgctcctagcaacagtgtcacgattccgactgctaaaactc
cagtgtgaggagtacatctgcctgaaggccatcattctgctcaattcgggtgtgttccct
ttcctctccagtaccatggaagctctgaacgacagcgagcagattcagatcatcctggac
aaaatcactgatgctctggttcactttatcaccagggcagggctgtcactgcagcagcag
tcccggagactagcccaactcctcctcctgctctcccacatccggcacatgagtaacaaa
ggaatggaacacctgtacagtatgaagtgtaagaatgtggtgccactgtatgacttgctc
ctggagatgctggatgctcacagaatgcatacaccaatggacaagaccccacctggagga
aatggtacaagtccaatgaatcgagggaccacaccatcctcttcttcattgtctctaaag
aagtctgacgtgagttttgaaacatccagataa
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