Scyliorhinus canicula (smaller spotted catshark): 119970799
Help
Entry
119970799 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119970799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119970799
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
119970799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_HEAT
Collagen
HEAT_GCN1_C
HEAT
Cnd3
HEAT_EZ
MIF4G
Cnd1
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
119970799
NCBI-ProteinID:
XP_038661901
LinkDB
All DBs
Position
8:complement(198489607..199049521)
Genome browser
AA seq
2289 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFGGRIAEDVNCLMGCRDES
LVTQLVHSLSQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYVVQS
GIMQQQIIQHQQYKLPQNSIHGSPASSTFQQSTISHSPSSRFVPPQSSSTNRYMTQQNSP
VPSPYAPQSPPGYMQYPQHPPSYTQHQQIQQELHGSPLVSGPTYSGSPQRPVQPCLIVQT
PSSPQQQQSTPTLAVSSPMISSGMRNIHDSKVASQMSGSSSNHHTDNSRHGSNEDYIHMV
HRLGSEDGDSSLRNASSFPLRSPQAVCSPASSDGTPKASRPPLILQSPPPYTSPRDAPPD
ILLDSPDRMGSKKKNKKPKLTKDDKEQADKTAMYDIVSSPSKDCTKLTLRLSRVRDQQDD
MLPNMDSSTENEAELNSVQFPEQTAKQPGTPNDIHGSMNVSAPCVPQQEQAFLQTQQVTV
LQQNNAVGTVKTAQSQPLQQQSQQTMTPYDEVELDALAEIERIERESAMERERCSKEVQD
KDKPLKKRKQDSFPQETAPGGGGPVSGGGANRPALLVSIDLQHAGRTDGQAAPPPESENT
KKPLELVRQNTDVSLTRPEDTTGVLKPKPENHPDAPKRKCENEGQKEKDNSRPDVIKPRP
ETPKQKSESRPETPKGKHDNRRDVAKLTPEKRLEISKHKHEGKTEHTKMKESRSDAPKPR
HEGRQSSEAPKEKRDLHQETQKQKSDEKNDSEKGKVDASKIRRPDTPKLIKSESDSKLTR
NETPKNNQTDCPKPVKGEKKVRSDSGDRGDRGDRGDRGDRGDRGDRGDRGDRGDRGDRGD
RGDRGDRGDRGDRGDRGDRGDRGDRGDRGDRGDRSERRSPEEQRLRSESPRVKHDNREPG
KTKPEVKDRAALKQSRRSDIPSGSLSSKDRDDRRLEGNKVKAETPNPLSDKDKFPSYLLG
GGRSNALKNFVIPKIKRDKDGNVCNEQRELRKSMDKNELKLKVEKMDLVEDLKKVIKPVV
VLHKLPFDEVQKFIKEAEEKNASRSSSKSKSRLPSKSSKGGIDQSVLKELPPDLLAEIES
TMPLCERVKMNKRKRSTVKEKPNYAEISSDEGDNDSDFESSRKRHKKDRGADKAWECEER
DRRILNELRKSSYSIESRRSSGSRYRERSPGSEEDSPPPSLIDIARKMRKREKQKKRKAY
EPKLTPEEMMDSSTFKRFTATVENILENLEDMDFTTLGDDDELPQELLLGKQQLNELSSE
SAKIKAMGIMDRLPTDKTVKVLSILEKNIQDGSKLSTLFNHDNETEDEEKLWRELILERV
TKSADACLTALNIMTSPNMSKAVYIDDVIERVIQFTKFHLQNTLYPQYDPVYRIDSHGSV
MSKHHEENRFHSRGGSSKAKRAKYSSHKQRVIVMLYNRVCDIVSNIAELLEIQLLTDTTI
LQVSSMGITPFFVENVSELQLCGIKLVTAVFSRYEKHRQLILEEMFASLAKLPTSKRSLR
NFRLNSSDMDGEPLFIQMVTALVLQLIQCVVHLPAAEKDSNAVDEDGNKKVDQDVLITNS
YETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGR
LLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVSCKMDRESIDRILKQVSGIEDEVQQ
LQKALLDYLDENTETDPSLMFARKFYIAQWFRDTTMETEKAMKSQNQKDDDSSDGAQHAK
EIESTGEIMQRAEKRKKFLRSVIKTAPAQFSTLRMNSANVDYEDACLIVRYLASMRPFAQ
SFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVR
EAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFSKVTEM
CVRMIRRVNDEEGIKKLVNETFQKLWFTPTPSHDAEGMTRKILNVTDVVAACRDTGYDWF
EQLLQNLLKSEEDASYKPVKKACVQIVDNLVEHILKYEESLADSDSKGMNTNCLVACLIT
LYLFSKIQPHLMVKHAMTLQPYLTTKCNTQSDFLVICNVAKILELVVPLMEHPSETFLAT
IEEDLMKLILKHGMTVVQHCVSCLGAVVNRVTHNYKFVWACFNRYYGALTKLKGQHHEDS
SNNALVGNKPALLRSLFTVGALCRHFDFDQEEFKGNTKVVIKEKVLELLLYFTKHEDEEV
QTKAIIGLGFVFIQHPDLMFEQEVKNLYNNILRDKEASIGLKIQVLKNLQTYLQEEDCRM
QQADKDCVP
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccacacttgctgggattgctagcctgact
gatttactgaatcagcttccgcttccctccccactgcctgcgaccaccaccaaaagcttg
ctgtttggagggagaattgctgaagatgtaaattgcctcatgggttgtcgggatgagagt
cttgtcacacagttagtacatagcctcagccaagtctccacggatcatatagaactgaag
gataatcttggcagtgatgacccagagggtgatattccagtcctcctgcaagctgtcctg
gctagaaaccccaatgtcttcagggagaaaagcatgcagaatcgatatgtggtacagagt
ggtattatgcaacaacagatcatccaacaccaacagtacaaactaccccagaattccata
catgggagccctgcatcctccacttttcaacagtccacaatctcgcacagcccttccagt
cgatttgtaccacctcaatcaagttcgaccaacagatatatgactcaacagaacagtcct
gtacccagtccatatgctccacagagccctccaggttacatgcaatatccacagcaccct
ccaagctacacacagcatcagcagatacaacaagagttgcatggttcccctctggtatca
ggtcctacatattctgggagccctcagagacctgtgcaaccctgtttgatagtccagact
ccgtcttctcctcagcagcaacagtcaacccccacgctagctgtatcgagcccaatgatt
tccagtggcatgcgaaatattcacgatagtaaagtggcaagtcagatgtcggggtcctca
tccaaccaccatacagataattctagacatggatcgaatgaggactacatacacatggtg
catcggcttggatcagaggatggtgattcttcattgaggaatgcttcttccttcccttta
agatccccacaggcagtgtgttctcctgcgagcagtgatggaactccaaaagcatccagg
ccgcctctgatcttgcagtcgccgcctccttacacctctcccagagatgccccacctgat
attctgctggactccccagacaggatgggaagcaagaagaaaaataaaaagcctaagctc
accaaggatgacaaagaacaggcagataagactgctatgtatgacattgtcagctctcca
tctaaggactgtacaaagctcactttgaggctatctcgagttcgagatcagcaggatgat
atgctcccaaacatggacagcagtacagaaaatgaggcagaattgaacagtgtgcagttc
ccagaacagactgcaaaacagccagggactcctaatgatatccatggctcaatgaatgtt
tctgctccatgtgtgcctcaacaggagcaggctttccttcaaactcagcaggtcactgtc
ttgcaacagaataatgcagttggaacagtgaaaacagcacagtcacagccactacagcaa
caatcacaacagactatgacgccatacgatgaggtagaattggatgctttagcagagatt
gaacggatagaacgagagtctgccatggagagagagagatgttccaaggaggtgcaggac
aaagacaaacctttaaagaaacggaagcaagactcatttccacaggagactgctccagga
ggtggtggtcctgtgagtggaggcggtgcaaacagacctgccctgttggtcagcattgat
ctacaacatgcaggaagaactgatggacaagcagcccctcctccagagtcagaaaacacg
aagaagcctttggagttggtacggcagaatacagatgtatcgttaacacggccagaagat
acaacaggagtattaaaacccaagccagaaaatcacccagatgcccccaagaggaaatgt
gaaaacgaggggcaaaaggaaaaggacaacagtcggcctgatgtgatcaaacctaggcct
gaaactccaaaacagaagagtgagagtcgaccagagacaccaaagggaaagcatgacaac
aggcgagatgtggctaaactaacaccagagaagagacttgaaatatctaaacacaagcac
gagggcaaaacggaacatacaaaaatgaaagagagtagatcagatgcaccaaagccacgc
catgaaggacggcaaagttcagaggctcccaaagagaaacgagatctgcaccaggaaacc
cagaaacagaaatcagatgagaaaaatgattctgaaaaaggaaaagtggacgcatctaag
atcaggagacccgatacccccaaattaatcaagagtgaatctgattctaaacttactcga
aatgagactcctaaaaataaccagacagactgtccaaaaccggtgaagggggaaaagaaa
gtgcgttctgattcaggtgaccgaggagatcgcggtgaccgaggagatcgcggtgaccga
ggagatcgcggtgaccgaggagatcgcggtgaccgaggagatcgcggtgaccgaggagat
cgcggtgaccgaggagatcgcggtgaccgaggagatcgcggtgaccgaggagatcgcggt
gaccgaggagatcgcggtgaccgaggagatcgcggtgaccgaagcgagcgccgttcacca
gaagaacaacggttgcgatcagaaagtcccagagtcaaacatgataacagagagcctggg
aaaacgaaacctgaagtgaaagatcgcgctgcattgaagcagagtagaagatcagacatt
ccatcaggatcactgagcagtaaagacagggacgaccgccgattggaggggaacaaagtg
aaagcagagactcccaaccctctttctgataaagacaaatttcccagctacctactgggg
ggtggaaggtccaatgcactaaaaaactttgtaattccaaaaatcaagcgggataaggat
gggaatgtttgtaatgagcagagggaattgaggaagtcgatggataagaatgaattaaaa
ttaaaagtggaaaaaatggatcttgtggaggatttgaagaaggtgatcaagcctgttgtg
gttcttcataagttgccctttgatgaagtgcagaaatttatcaaggaagccgaagaaaag
aatgcatcaaggagttccagcaaatctaagagcagattgccctccaagtcaagtaaaggt
ggtattgaccaatctgtactgaaggagcttccccctgatctccttgctgagatagaatcg
acaatgccactctgcgagcgtgtcaagatgaacaaacggaaacgcagcacagtgaaggag
aagccaaactatgcagaaatcagctcggatgagggtgataatgacagcgactttgaatct
tccaggaagaggcacaagaaggaccgaggggcagataaagcctgggagtgtgaagaacgt
gaccgccggattctaaatgaattgagaaaaagcagctattctattgaaagtagacggagc
tcaggaagcagatatcgggaacggagcccaggatccgaggaggattcaccccctcccagc
ctcattgatattgccagaaagatgaggaaaagagaaaaacaaaagaaaaggaaagcctat
gaacctaaacttacacctgaagaaatgatggactcatcaacattcaaacgatttacagcc
acagtggaaaatatcctagaaaatctggaggatatggattttactacattaggtgatgat
gatgagttacctcaggaattattactgggcaagcaacagctgaacgaattgagcagtgaa
tctgccaaaatcaaagctatgggcatcatggaccggcttccaacagacaagaccgtgaag
gtgctaagtatcttggaaaagaacatacaggacggatccaagctttctactttgttcaac
catgacaatgaaactgaagatgaggagaagctatggagagagctgatcttggagagagtg
acgaaatcagctgatgcttgcctgactgcactgaatattatgacgtcacccaacatgtct
aaagctgtgtatatcgatgatgtgatcgagagggtgatccagttcaccaaattccacctg
caaaacacactgtacccacagtatgaccccgtctacagaatagactcacacggatcagtg
atgtccaaacaccatgaggagaatcgctttcactcaagaggtggcagttcaaaagctaag
cgagcaaagtactccagccataaacaaagagtgatcgtcatgctgtacaacagagtgtgc
gacattgtctccaacatagcagaactgttggagatacagctcctcactgacactacaatc
ttacaggtttcttccatgggaattacacccttttttgtggaaaacgttagtgagttgcag
ctgtgcggcatcaagctagtgactgctgtgttctcaaggtatgagaagcacagacagttg
atattagaagagatgtttgcctcgcttgcaaaactcccaacaagtaagaggagtctaaga
aatttcagattaaacagcagtgatatggacggagagccactctttattcagatggtgaca
gccttagtgttgcagctgatacaatgtgttgtgcatctcccagctgcagagaaggattcc
aacgctgttgatgaggatggaaacaagaaggttgatcaagatgttctaattaccaactcg
tatgaaacagcaatgagaacggcccagaacttcctctcggtttttcttaaaaagtgtggc
agcaaacaaggagaagaggattacagaccactctttgaaaactttgttcaggatctcctt
tccactgttaacaaaccagagtggccagcagctgaattgttgctgagcctcttgggcagg
ctactggttcaccagttcagcaacaagtcgacagagatggctctacgggtagcctctctt
gattacttaggaactgtggccgcacggttgaggaaagatgctgtatcctgcaagatggac
cgggaatcaattgatcggatactcaaacaggtttctggaattgaagatgaagttcagcag
ctacagaaagcactgctggattacctggatgagaatacggagaccgatccctcactaatg
tttgctaggaaattttacattgcacagtggtttcgtgacacaacaatggagactgaaaag
gcaatgaagtcacagaaccagaaggatgacgactcatcagatggggcacagcatgctaag
gagatagaatccacaggcgagattatgcaacgagcagaaaaacgcaagaagtttcttcgc
tctgtgatcaaaactgccccagctcagtttagcactctgagaatgaactctgcaaatgtg
gattatgaagatgcctgtctgattgttcgatacttggcctccatgaggccgtttgcacag
agctttgatatttatttgacacagattctacgtgtactaggagaaagtgcgatcgctgtc
cgaacaaaggccatgaagtgtctgtctgaggtagttgctgtggatcccagcattcttgcc
aggctggacatgcaacgtggggtccatggacgtctgatggacaattccacaagtgtgcgc
gaagcggctgtggagttactgggtcgctttgtgctcagccgacctcagctcactgagcag
tattacgacatgttgatcgagaggatactggacaccggtatcagtgtgagaaagagggtg
atcaagattctgcgcgacatctgtattgagcaaccaaccttctctaaagtgaccgagatg
tgtgtgcgaatgattcgcagagtcaatgacgaagagggcattaagaaactagtaaatgaa
acattccagaagctctggttcactcccacaccttctcacgatgctgaagggatgacgcgg
aaaatcctaaatgtcacagatgtggttgctgcatgcagagatacgggatatgattggttt
gagcagcttcttcagaatttgttgaagtctgaggaagatgcatcgtacaagcctgtgaag
aaggcctgtgtgcagatagtggataatctggtggaacacattctgaaatatgaggaatcg
ttagcagattctgatagcaaaggcatgaataccaactgtctggtggcctgtttaatcacc
ttgtacttgttcagcaaaatccaacctcatctgatggtgaaacatgcaatgacgctccag
ccatatcttaccacaaagtgcaatacacagagtgatttcctcgtcatatgcaatgtggca
aagatcttggagctggtcgtcccgttgatggagcatccgagtgagaccttcttggccacg
atagaggaagacctcatgaaactcatccttaagcatggaatgacggttgttcaacactgt
gtgagctgtctgggtgctgtagtgaacagagtaactcacaactacaaatttgtgtgggcc
tgtttcaatagatattatggtgctctaacaaaactgaagggacagcaccatgaggattcc
agcaacaatgctctagttggcaataaaccggccctccttcgctcccttttcactgttggt
gcactgtgccgtcactttgactttgatcaggaggagtttaaaggcaacactaaggtggtt
attaaagagaaggtgctcgaacttctgctctacttcacaaagcacgaagacgaggaagtt
cagaccaaagcaatcataggcttgggttttgtattcatacagcatccagatctgatgttt
gaacaagaagtaaagaatttgtacaacaatattcttcgagacaaagaagcctcaatcgga
ctgaaaatccaggtgctgaagaatcttcagacgtatctgcaggaggaggactgccggatg
cagcaagctgataaagattgtgtaccatag
DBGET
integrated database retrieval system
