Scyliorhinus canicula (smaller spotted catshark): 119970927
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Entry
119970927 CDS
T11175
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a isoform X1
KO
K09382
paired box protein 1/9
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119970927 (pax1a)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119970927 (pax1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_SB
Motif
Other DBs
NCBI-GeneID:
119970927
NCBI-ProteinID:
XP_038661968
LinkDB
All DBs
Position
1:199307525..199335568
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AA seq
371 aa
AA seq
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MFYQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR
YNETGSILPGAIGGSKPRVTTPTVVKYIREYKQGDPGIFAWEIRDRLLADAVCDKYNVPS
VSSISRILRNKIGNLSHSGHYEASKQLPSQPTMPYNPIYQYSYPNHMSSATGKMGSVTGV
PVPGVTGHMGIHRTWPSAHSVSNILGLRSIVEQAAAYGGSEVSAYQTKMEDWSNVNRAAF
SSAQSVNGIEKQAIDPDLKYPQPPSALPAASSFVPACAVGPYPSSNQVPGYGVYSGPGAG
YVTGHPWQSQSSSLSHSGPGIGMHGGDIHAPMPFKHLAAREVADRKPGSPANKPSESHSN
PHGLSIPASST
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcagacttacggagaggttaaccaactcggaggcgtattcgttaacgggagg
ccccttcccaacgccatcaggttgaggatagtggagttggcacaactggggattcgaccc
tgcgacatcagccggcagctccgggtgtcccacggctgcgtgagtaaaatcctggcccgt
tacaacgagacgggctccatcttaccgggggcgatcggaggcagcaagcccagggtcacc
acccccaccgtggtgaagtacatcagagagtacaagcagggcgaccccggcatcttcgcc
tgggagattcgggacaggctcctggcggacgccgtctgtgacaagtacaacgtgccttcg
gtgagctccatcagccggatcctgcggaacaagatcggcaacctgtcgcactcgggtcac
tacgaggccagcaagcagctcccctcgcagcccacgatgccctacaaccccatctaccag
tactcctaccccaaccacatgtcctcggccaccggcaaaatgggcagcgtcaccggcgtc
ccggtgccaggcgttacggggcacatgggcatccaccggacctggccctccgctcactca
gtcagcaatatcctgggcctcaggagcatcgtggaacaggcagctgcttatggtggctcc
gaggtttcagcttatcaaaccaaaatggaagattggagcaatgtcaatcgggcagccttc
tcctcagctcaaagtgtcaacgggattgagaaacaggcgatcgatccggatctgaaatac
ccccagcctccttccgcgctgcctgctgcgagcagctttgttcccgcctgtgctgttggc
ccttatccctcctcgaaccaggtaccgggctatggagtgtacagcgggcccggagccggc
tacgtgactggccacccctggcagtcccagagcagcagcctctcccattccgggccagga
attggcatgcacggcggagacatccacgcaccaatgcccttcaaacacctcgcagcgaga
gaagtggccgacaggaaacccggcagcccggcgaacaaaccctccgaatctcacagcaac
ccgcacggcctctcaatcccggcctccagtacgtaa
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