Scyliorhinus canicula (smaller spotted catshark): 119971054
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Entry
119971054 CDS
T11175
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
119971054 (gpcpd1)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
119971054 (gpcpd1)
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GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
PI-PLC-X
Phage_tail_APC
Motif
Other DBs
NCBI-GeneID:
119971054
NCBI-ProteinID:
XP_038662112
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All DBs
Position
1:complement(202269785..202373611)
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AA seq
686 aa
AA seq
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MSTSQVTFKIKGVTLPGEVFAVCGNSAVLGNWYPQKAVFLEPDANDSLIWRATVILPGAT
VFQYRYFKCYVIERKNPADLRQVLVNKWETHPHPRSFNSSEVECILNDGYFGIHTGVEKL
DSGWLTCQSEIRLRLHYSEKPPVSISKKKFKKSRFRVKLTLEGFEEEEEDEDDDKLVTTS
VQKMSNTLEISLISDSGYKSRHSQPECGYALEPGQWAEYSIQTMEPDNLELIFDFFEEEL
GVTVVQGDALPGLVGTACLLSSTIIEKSSGIITLPIMSRNSRQTIGKVKVDYLIIKPLEA
HICDMSPSLSKYWKPRMALDVGHRGAGNTSSANLAKVRENTIASFKNAASHGAAFVEFDV
HLSKDHVPIVYHDLTCCISMKKKVDKESSELFEIPVKELTFQQLQLLKLAHVAALKVNGD
KENSMDDENDASENQPFPSLQQVLACVPEHIGFNIEVKWPYQLKDGTWEGNLPSYLDMNQ
AIDIILKCTLENASSRRIVFSSFVADVCSMIRQKQNRYPVLFLTQGYSNTYPELMDLRCQ
STPIAMSFAQSESILGINVHTEDLLRNLDYIQQAKSKELVIFCWGDDTNEFENRRILKES
GIHGLIYDKICDFLLGQTDIFEVEELEELKQQLSEETFVNCTCSDVNHCQIPVENFNGGS
YPSEIKSCEQEAYSTESDSGQSCSSF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcacaggtcactttcaaaataaagggagttactcttccaggagaagtgttt
gcagtatgtggaaattcagctgtactcggcaattggtatccacagaaagcagtgtttctg
gaaccagatgcaaatgatagcctaatatggagagcaacagtcattctcccaggcgccact
gttttccaatatcgctattttaaatgttacgtcatagaacgcaagaaccctgctgatctt
cggcaagtgctagtcaacaagtgggagactcatcctcatccacgatcatttaattcgtcg
gaagtggagtgcattttgaatgatggatattttggaattcacactggtgttgagaaattg
gattctgggtggttaacttgccaaagcgaaattcgtttgaggttgcactattctgagaaa
cctccagtttccatatccaagaagaagttcaagaagtccagatttagggtgaagctgaca
ttggaaggttttgaggaggaggaggaggatgaagatgatgacaaactggttactacctca
gtgcagaaaatgtccaatactttagaaatttccttaatcagcgatagtggatacaaatca
cgtcattcgcaaccagagtgtggatatgccttggaacctggacagtgggcagagtatagc
attcaaaccatggaaccagataacctggagctcatttttgacttctttgaggaagagttg
ggtgtaacagtagtgcaaggtgatgcactacctggccttgtaggaacagcctgtctgcta
tcttcaacaattatagaaaaatccagtggaattatcacacttcccatcatgagtagaaat
tctagacaaactattggaaaagtgaaagttgactacctcataattaagcctttggaagca
catatttgtgacatgtctccttccttatccaagtattggaaaccaagaatggctttagat
gttgggcacagaggtgctggaaatacatcatctgcgaacctcgcaaaggttcgagaaaac
acaatagcttcctttaaaaatgccgctagtcatggtgctgccttcgtggagtttgatgtc
catctttcaaaagaccatgttcctattgtatatcacgatcttacatgttgtatatcaatg
aaaaagaaagtggacaaagaatcttcggaattatttgaaattccagtaaaggaactcaca
tttcaacagttgcagctattaaagttggctcatgtggctgctctgaaggtgaatggcgat
aaagaaaattcaatggatgatgaaaatgatgcatcagaaaaccagccattcccttccttg
cagcaggttttagcatgtgtgcctgaacacattggattcaacattgaagttaaatggcct
tatcaactaaaagatggtacctgggagggcaacctgccatcctatttggacatgaatcaa
gctattgacataatcctaaaatgtaccttggaaaatgcatccagtcgaaggatcgtgttc
tcctcgtttgttgctgacgtctgttcaatgatcaggcagaaacaaaacaggtatccagtt
cttttcttgacccaaggctattctaacacctatccagagcttatggatctcaggtgccaa
agcacaccaattgcaatgagttttgcacaatctgaaagcattctaggaattaacgttcac
acagaggacttgctgcgaaatctggactatattcaacaagccaagtcaaaagaattagtc
attttttgttggggcgatgataccaatgagtttgaaaacaggagaatactgaaggagagt
ggaattcatggcctcatctatgataagatctgtgactttctactgggacagacagatatc
ttcgaagtagaagaattggaggaattgaagcaacaattgtcagaggagacatttgttaat
tgcacatgttctgatgtcaaccattgtcaaattccagtggagaacttcaatggcggcagt
tatccaagtgaaataaagagctgtgaacaagaagcatacagtacagaatctgactctggg
caaagctgcagttcattttga
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